Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm24429-201ENSMUST00000104076 132 ntBASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm23593-201ENSMUST00000104309 120 ntBASIC6.29□□□□□ -1.4
Trim56Q80VI1 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm13887-201ENSMUST00000119009 344 ntBASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm16100-201ENSMUST00000120489 231 ntBASIC6.29□□□□□ -1.4
Trim56Q80VI1 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Mup-ps2-201ENSMUST00000142602 533 ntBASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm15974-201ENSMUST00000159103 531 ntBASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm22857-201ENSMUST00000174969 134 ntBASIC6.29□□□□□ -1.4
Trim56Q80VI1 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm27781-201ENSMUST00000185185 92 ntBASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm37779-201ENSMUST00000194221 3380 ntBASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm37882-201ENSMUST00000195254 196 ntBASIC6.29□□□□□ -1.4
Trim56Q80VI1 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC6.29□□□□□ -1.4
Trim56Q80VI1 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm43315-201ENSMUST00000198120 313 ntBASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm44048-201ENSMUST00000204531 361 ntBASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm19256-201ENSMUST00000218550 231 ntBASIC6.29□□□□□ -1.4
Trim56Q80VI1 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 AC102431.1-201ENSMUST00000223773 1449 ntBASIC6.29□□□□□ -1.4
Trim56Q80VI1 AC192088.3-201ENSMUST00000227858 831 ntBASIC6.29□□□□□ -1.4
Trim56Q80VI1 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 n-R5s62-201ENSMUST00000082780 96 ntBASIC6.29□□□□□ -1.4
Trim56Q80VI1 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim56Q80VI1 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC6.29□□□□□ -1.4
Trim56Q80VI1 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim56Q80VI1 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm42600-201ENSMUST00000202081 3588 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm23431-201ENSMUST00000104006 107 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm25919-201ENSMUST00000104271 132 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm12386-201ENSMUST00000117380 688 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm16205-201ENSMUST00000117720 1027 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm11859-201ENSMUST00000118099 455 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Zfp389-201ENSMUST00000118425 675 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm12755-201ENSMUST00000122297 282 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Trim56Q80VI1 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm22158-201ENSMUST00000158411 126 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm17907-201ENSMUST00000173150 710 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm10784-201ENSMUST00000178715 238 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm5527-201ENSMUST00000179821 642 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Mir6400-201ENSMUST00000184870 92 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm28116-201ENSMUST00000189064 387 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm18468-201ENSMUST00000207321 369 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm18470-201ENSMUST00000207467 420 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm18465-201ENSMUST00000207468 369 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm18464-201ENSMUST00000207803 420 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm18458-201ENSMUST00000207908 369 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm18461-201ENSMUST00000208421 420 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms