Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Nup98Q6PFD9 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Nup98Q6PFD9 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Nup98Q6PFD9 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Nup98Q6PFD9 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.58□□□□□ -1.68
Nup98Q6PFD9 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Nup98Q6PFD9 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Nup98Q6PFD9 Gm27036-201ENSMUST00000182465 980 ntBASIC4.58□□□□□ -1.68
Nup98Q6PFD9 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Nup98Q6PFD9 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.58□□□□□ -1.68
Nup98Q6PFD9 Gm44355-201ENSMUST00000200417 104 ntBASIC4.58□□□□□ -1.68
Nup98Q6PFD9 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Nup98Q6PFD9 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Nup98Q6PFD9 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
Nup98Q6PFD9 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Nup98Q6PFD9 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.58□□□□□ -1.68
Nup98Q6PFD9 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Nup98Q6PFD9 Gm11971-201ENSMUST00000117715 288 ntBASIC4.58□□□□□ -1.68
Nup98Q6PFD9 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Nup98Q6PFD9 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC4.58□□□□□ -1.68
Nup98Q6PFD9 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Nup98Q6PFD9 Gm20177-201ENSMUST00000203705 334 ntBASIC4.58□□□□□ -1.68
Nup98Q6PFD9 Gm8748-201ENSMUST00000211125 587 ntBASIC4.58□□□□□ -1.68
Nup98Q6PFD9 Gm19073-201ENSMUST00000219978 555 ntBASIC4.58□□□□□ -1.68
Nup98Q6PFD9 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Nup98Q6PFD9 Gm23736-201ENSMUST00000082553 75 ntBASIC4.58□□□□□ -1.68
Nup98Q6PFD9 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC4.58□□□□□ -1.68
Nup98Q6PFD9 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Nup98Q6PFD9 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Nup98Q6PFD9 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Nup98Q6PFD9 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Gm13831-201ENSMUST00000118764 302 ntBASIC4.57□□□□□ -1.68
Nup98Q6PFD9 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Gm15795-201ENSMUST00000160969 553 ntBASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Gm24949-201ENSMUST00000183609 215 ntBASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Gm19637-201ENSMUST00000185933 579 ntBASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Gm28660-201ENSMUST00000186496 253 ntBASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Gm29334-201ENSMUST00000190334 357 ntBASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Gm45420-201ENSMUST00000211243 425 ntBASIC4.57□□□□□ -1.68
Nup98Q6PFD9 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC4.57□□□□□ -1.68
Nup98Q6PFD9 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.57□□□□□ -1.68
Nup98Q6PFD9 AC160865.1-201ENSMUST00000219873 151 ntBASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC4.57□□□□□ -1.68
Nup98Q6PFD9 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.57□□□□□ -1.68
Nup98Q6PFD9 AC130547.1-201ENSMUST00000228079 1047 ntBASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Gm5185-201ENSMUST00000080271 619 ntBASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Gm25480-201ENSMUST00000083217 133 ntBASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Nup98Q6PFD9 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Gm11566-201ENSMUST00000118550 203 ntBASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Gm14845-201ENSMUST00000121259 306 ntBASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Gm24244-201ENSMUST00000157317 130 ntBASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Mir1934-201ENSMUST00000158127 83 ntBASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Gm44773-201ENSMUST00000207374 557 ntBASIC4.56□□□□□ -1.68
Nup98Q6PFD9 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Nup98Q6PFD9 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Gm4991-201ENSMUST00000118899 1552 ntBASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Nup98Q6PFD9 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Gm8757-201ENSMUST00000119660 372 ntBASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Gm25667-201ENSMUST00000157701 275 ntBASIC4.56□□□□□ -1.68
Nup98Q6PFD9 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Gm6303-201ENSMUST00000210123 471 ntBASIC4.56□□□□□ -1.68
Nup98Q6PFD9 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.56□□□□□ -1.68
Nup98Q6PFD9 AC134864.1-201ENSMUST00000226326 511 ntBASIC4.56□□□□□ -1.68
Nup98Q6PFD9 AC130673.2-201ENSMUST00000228091 797 ntBASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Gm23518-201ENSMUST00000082835 153 ntBASIC4.56□□□□□ -1.68
Nup98Q6PFD9 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Nup98Q6PFD9 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Nup98Q6PFD9 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC4.55□□□□□ -1.68
Nup98Q6PFD9 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms