Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.99□□□□□ -1.61
Foxc1Q61572 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.99□□□□□ -1.61
Foxc1Q61572 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.99□□□□□ -1.61
Foxc1Q61572 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
Foxc1Q61572 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Foxc1Q61572 AC131687.1-201ENSMUST00000225931 5446 ntBASIC4.99□□□□□ -1.61
Foxc1Q61572 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Foxc1Q61572 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Foxc1Q61572 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Foxc1Q61572 Gm44130-201ENSMUST00000205157 3004 ntBASIC4.99□□□□□ -1.61
Foxc1Q61572 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Foxc1Q61572 AC126549.1-201ENSMUST00000225044 3687 ntBASIC4.99□□□□□ -1.61
Foxc1Q61572 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Foxc1Q61572 AC158388.2-201ENSMUST00000223665 1314 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Foxc1Q61572 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Foxc1Q61572 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm14324-201ENSMUST00000121358 3051 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Foxc1Q61572 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Foxc1Q61572 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
Foxc1Q61572 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
Foxc1Q61572 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
Foxc1Q61572 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
Foxc1Q61572 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm38077-201ENSMUST00000193657 3245 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Foxc1Q61572 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Foxc1Q61572 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Foxc1Q61572 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm25877-201ENSMUST00000104326 129 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm25724-201ENSMUST00000104531 117 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Foxc1Q61572 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Foxc1Q61572 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm16073-201ENSMUST00000116032 517 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm12653-201ENSMUST00000117778 561 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm13006-201ENSMUST00000118683 214 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm15026-201ENSMUST00000119219 458 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm23463-201ENSMUST00000122468 99 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm25106-201ENSMUST00000122672 134 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Foxc1Q61572 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm12504-202ENSMUST00000148026 306 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm23829-201ENSMUST00000157392 270 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm25555-201ENSMUST00000158078 111 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm23179-201ENSMUST00000158693 304 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm4373-201ENSMUST00000178571 556 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm26557-201ENSMUST00000180756 493 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm5368-201ENSMUST00000189012 589 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm37568-201ENSMUST00000191755 364 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm9240-201ENSMUST00000206527 742 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Foxc1Q61572 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC4.98□□□□□ -1.61
Foxc1Q61572 AC125374.2-201ENSMUST00000214278 162 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC4.98□□□□□ -1.61
Foxc1Q61572 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm8672-201ENSMUST00000221200 332 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC4.98□□□□□ -1.61
Foxc1Q61572 AC154861.1-201ENSMUST00000223767 800 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
Foxc1Q61572 AC118639.1-201ENSMUST00000227204 338 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Foxc1Q61572 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm14895-201ENSMUST00000121858 1361 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Foxc1Q61572 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
Foxc1Q61572 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Foxc1Q61572 Gm44735-201ENSMUST00000206197 1752 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Foxc1Q61572 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Foxc1Q61572 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Foxc1Q61572 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
Foxc1Q61572 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Foxc1Q61572 Dnm3os-201ENSMUST00000139662 7928 ntBASIC4.98□□□□□ -1.61
Foxc1Q61572 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Foxc1Q61572 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Foxc1Q61572 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Foxc1Q61572 AC152922.2-201ENSMUST00000213353 3879 ntBASIC4.97□□□□□ -1.61
Foxc1Q61572 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Foxc1Q61572 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Foxc1Q61572 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Foxc1Q61572 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.97□□□□□ -1.61
Foxc1Q61572 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Foxc1Q61572 Gm37541-201ENSMUST00000192464 2315 ntBASIC4.97□□□□□ -1.61
Foxc1Q61572 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Foxc1Q61572 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC4.97□□□□□ -1.61
Foxc1Q61572 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Foxc1Q61572 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms