Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Mir1946b-201ENSMUST00000157853 133 ntBASIC6.15□□□□□ -1.42
Col6a1Q04857 Mir1945-201ENSMUST00000157919 78 ntBASIC6.15□□□□□ -1.42
Col6a1Q04857 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Col6a1Q04857 Gm27286-201ENSMUST00000184934 179 ntBASIC6.15□□□□□ -1.42
Col6a1Q04857 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.15□□□□□ -1.42
Col6a1Q04857 Gm29124-201ENSMUST00000186576 452 ntBASIC6.15□□□□□ -1.42
Col6a1Q04857 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Col6a1Q04857 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Col6a1Q04857 Gm43018-201ENSMUST00000198075 1275 ntBASIC6.15□□□□□ -1.42
Col6a1Q04857 Gm43559-201ENSMUST00000198755 466 ntBASIC6.15□□□□□ -1.42
Col6a1Q04857 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC6.15□□□□□ -1.42
Col6a1Q04857 Gm45171-201ENSMUST00000206360 736 ntBASIC6.15□□□□□ -1.42
Col6a1Q04857 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC6.15□□□□□ -1.42
Col6a1Q04857 Gm18247-201ENSMUST00000222937 601 ntBASIC6.15□□□□□ -1.42
Col6a1Q04857 Gm7887-201ENSMUST00000056948 537 ntBASIC6.15□□□□□ -1.42
Col6a1Q04857 Gm23795-201ENSMUST00000084006 137 ntBASIC6.15□□□□□ -1.42
Col6a1Q04857 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Col6a1Q04857 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Col6a1Q04857 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Col6a1Q04857 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col6a1Q04857 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.15□□□□□ -1.43
Col6a1Q04857 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Col6a1Q04857 Gm42598-201ENSMUST00000200110 2437 ntBASIC6.15□□□□□ -1.43
Col6a1Q04857 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col6a1Q04857 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.14□□□□□ -1.43
Col6a1Q04857 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col6a1Q04857 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC6.14□□□□□ -1.43
Col6a1Q04857 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col6a1Q04857 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Col6a1Q04857 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col6a1Q04857 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col6a1Q04857 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col6a1Q04857 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col6a1Q04857 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm26376-201ENSMUST00000104784 110 ntBASIC6.14□□□□□ -1.43
Col6a1Q04857 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm15076-201ENSMUST00000117076 474 ntBASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm14159-201ENSMUST00000119832 451 ntBASIC6.14□□□□□ -1.43
Col6a1Q04857 Mup-ps21-201ENSMUST00000119998 448 ntBASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm15803-201ENSMUST00000120118 394 ntBASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm11344-201ENSMUST00000122011 335 ntBASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm12755-201ENSMUST00000122297 282 ntBASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm23327-201ENSMUST00000157420 78 ntBASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm25909-201ENSMUST00000157619 121 ntBASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm24853-201ENSMUST00000158026 121 ntBASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Col6a1Q04857 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm20523-201ENSMUST00000174340 1124 ntBASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm37421-201ENSMUST00000193088 132 ntBASIC6.14□□□□□ -1.43
Col6a1Q04857 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm45628-201ENSMUST00000210849 274 ntBASIC6.14□□□□□ -1.43
Col6a1Q04857 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
Col6a1Q04857 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm8288-201ENSMUST00000223406 593 ntBASIC6.14□□□□□ -1.43
Col6a1Q04857 AC105407.3-201ENSMUST00000224161 648 ntBASIC6.14□□□□□ -1.43
Col6a1Q04857 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col6a1Q04857 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm23624-201ENSMUST00000082463 321 ntBASIC6.14□□□□□ -1.43
Col6a1Q04857 Snord15b-201ENSMUST00000083032 145 ntBASIC6.14□□□□□ -1.43
Col6a1Q04857 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col6a1Q04857 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col6a1Q04857 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.14□□□□□ -1.43
Col6a1Q04857 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.14□□□□□ -1.43
Col6a1Q04857 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm19552-201ENSMUST00000194744 2833 ntBASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Col6a1Q04857 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC6.14□□□□□ -1.43
Col6a1Q04857 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col6a1Q04857 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Col6a1Q04857 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col6a1Q04857 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Col6a1Q04857 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC6.14□□□□□ -1.43
Col6a1Q04857 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC6.14□□□□□ -1.43
Col6a1Q04857 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC6.13□□□□□ -1.43
Col6a1Q04857 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a1Q04857 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Col6a1Q04857 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a1Q04857 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a1Q04857 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Col6a1Q04857 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a1Q04857 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a1Q04857 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.13□□□□□ -1.43
Col6a1Q04857 Gm14793-201ENSMUST00000118739 311 ntBASIC6.13□□□□□ -1.43
Col6a1Q04857 Gm11826-201ENSMUST00000118781 438 ntBASIC6.13□□□□□ -1.43
Col6a1Q04857 Gm12607-201ENSMUST00000120724 493 ntBASIC6.13□□□□□ -1.43
Col6a1Q04857 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC6.13□□□□□ -1.43
Col6a1Q04857 Gm12322-201ENSMUST00000121605 389 ntBASIC6.13□□□□□ -1.43
Col6a1Q04857 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC6.13□□□□□ -1.43
Col6a1Q04857 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Col6a1Q04857 Gm2343-201ENSMUST00000161177 1042 ntBASIC6.13□□□□□ -1.43
Col6a1Q04857 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC6.13□□□□□ -1.43
Col6a1Q04857 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms