Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.75□□□□□ -1.65
NcanP55066 AC121542.1-201ENSMUST00000227245 721 ntBASIC4.75□□□□□ -1.65
NcanP55066 AC140209.1-201ENSMUST00000227875 284 ntBASIC4.75□□□□□ -1.65
NcanP55066 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
NcanP55066 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
NcanP55066 Gm10237-201ENSMUST00000078393 273 ntBASIC4.75□□□□□ -1.65
NcanP55066 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.75□□□□□ -1.65
NcanP55066 AF357428-201ENSMUST00000083815 69 ntBASIC4.75□□□□□ -1.65
NcanP55066 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
NcanP55066 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
NcanP55066 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NcanP55066 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
NcanP55066 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
NcanP55066 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.75□□□□□ -1.65
NcanP55066 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NcanP55066 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NcanP55066 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NcanP55066 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
NcanP55066 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NcanP55066 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NcanP55066 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NcanP55066 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NcanP55066 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NcanP55066 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NcanP55066 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NcanP55066 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
NcanP55066 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC4.74□□□□□ -1.65
NcanP55066 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
NcanP55066 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NcanP55066 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
NcanP55066 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.74□□□□□ -1.65
NcanP55066 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NcanP55066 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
NcanP55066 Gm11349-201ENSMUST00000122209 1116 ntBASIC4.74□□□□□ -1.65
NcanP55066 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC4.74□□□□□ -1.65
NcanP55066 Gm26088-201ENSMUST00000157896 131 ntBASIC4.74□□□□□ -1.65
NcanP55066 Gm16300-201ENSMUST00000160031 1279 ntBASIC4.74□□□□□ -1.65
NcanP55066 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NcanP55066 Mir3092-201ENSMUST00000174954 96 ntBASIC4.74□□□□□ -1.65
NcanP55066 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC4.74□□□□□ -1.65
NcanP55066 Gm29408-201ENSMUST00000187536 216 ntBASIC4.74□□□□□ -1.65
NcanP55066 Gm43717-201ENSMUST00000198684 310 ntBASIC4.74□□□□□ -1.65
NcanP55066 Gm43093-201ENSMUST00000202439 1213 ntBASIC4.74□□□□□ -1.65
NcanP55066 Gm5876-201ENSMUST00000203735 243 ntBASIC4.74□□□□□ -1.65
NcanP55066 Gm35876-201ENSMUST00000205044 459 ntBASIC4.74□□□□□ -1.65
NcanP55066 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.74□□□□□ -1.65
NcanP55066 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.74□□□□□ -1.65
NcanP55066 AC156803.1-201ENSMUST00000224407 820 ntBASIC4.74□□□□□ -1.65
NcanP55066 AC154184.2-201ENSMUST00000225335 349 ntBASIC4.74□□□□□ -1.65
NcanP55066 AC154738.1-201ENSMUST00000227054 368 ntBASIC4.74□□□□□ -1.65
NcanP55066 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NcanP55066 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NcanP55066 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC4.74□□□□□ -1.65
NcanP55066 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NcanP55066 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
NcanP55066 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
NcanP55066 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NcanP55066 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
NcanP55066 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.74□□□□□ -1.65
NcanP55066 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC4.74□□□□□ -1.65
NcanP55066 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC4.73□□□□□ -1.65
NcanP55066 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NcanP55066 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.73□□□□□ -1.65
NcanP55066 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NcanP55066 Gm13195-201ENSMUST00000117229 261 ntBASIC4.73□□□□□ -1.65
NcanP55066 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC4.73□□□□□ -1.65
NcanP55066 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC4.73□□□□□ -1.65
NcanP55066 Gm15986-201ENSMUST00000122153 400 ntBASIC4.73□□□□□ -1.65
NcanP55066 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NcanP55066 Gm26276-201ENSMUST00000157099 109 ntBASIC4.73□□□□□ -1.65
NcanP55066 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC4.73□□□□□ -1.65
NcanP55066 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
NcanP55066 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.73□□□□□ -1.65
NcanP55066 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
NcanP55066 Mir1251-201ENSMUST00000175486 84 ntBASIC4.73□□□□□ -1.65
NcanP55066 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC4.73□□□□□ -1.65
NcanP55066 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC4.73□□□□□ -1.65
NcanP55066 Gm27315-201ENSMUST00000183977 154 ntBASIC4.73□□□□□ -1.65
NcanP55066 Gm29104-201ENSMUST00000186304 222 ntBASIC4.73□□□□□ -1.65
NcanP55066 Gm18177-201ENSMUST00000188373 404 ntBASIC4.73□□□□□ -1.65
NcanP55066 Gm29704-201ENSMUST00000196011 253 ntBASIC4.73□□□□□ -1.65
NcanP55066 Gm43531-201ENSMUST00000200676 1114 ntBASIC4.73□□□□□ -1.65
NcanP55066 Gm42458-201ENSMUST00000201914 369 ntBASIC4.73□□□□□ -1.65
NcanP55066 Gm44277-201ENSMUST00000205128 649 ntBASIC4.73□□□□□ -1.65
NcanP55066 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC4.73□□□□□ -1.65
NcanP55066 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.73□□□□□ -1.65
NcanP55066 Zmym2-202ENSMUST00000223669 1281 ntBASIC4.73□□□□□ -1.65
NcanP55066 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NcanP55066 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
NcanP55066 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
NcanP55066 Gm25005-201ENSMUST00000083812 156 ntBASIC4.73□□□□□ -1.65
NcanP55066 Gm10704-201ENSMUST00000098952 730 ntBASIC4.73□□□□□ -1.65
NcanP55066 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NcanP55066 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
NcanP55066 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
NcanP55066 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.73□□□□□ -1.65
NcanP55066 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NcanP55066 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NcanP55066 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NcanP55066 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms