Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC6.37□□□□□ -1.39
Col18a1P39061 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Col18a1P39061 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col18a1P39061 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col18a1P39061 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Col18a1P39061 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
Col18a1P39061 AC122357.1-201ENSMUST00000221652 1515 ntBASIC6.37□□□□□ -1.39
Col18a1P39061 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col18a1P39061 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col18a1P39061 Snora64-201ENSMUST00000104521 134 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Gm13728-201ENSMUST00000117471 400 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Gm5757-201ENSMUST00000117494 528 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Gm13574-201ENSMUST00000120482 394 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Gm12578-201ENSMUST00000121244 417 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Gm6079-201ENSMUST00000121356 404 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Gm11254-201ENSMUST00000122368 653 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Gm24371-201ENSMUST00000122662 267 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Gm10444-201ENSMUST00000126708 148 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Gm13092-201ENSMUST00000136346 260 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Spanxn4-201ENSMUST00000172433 424 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC6.36□□□□□ -1.39
Col18a1P39061 Gm37946-201ENSMUST00000192064 347 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC6.36□□□□□ -1.39
Col18a1P39061 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Col18a1P39061 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Col18a1P39061 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Col18a1P39061 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
Col18a1P39061 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
Col18a1P39061 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col18a1P39061 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col18a1P39061 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Col18a1P39061 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col18a1P39061 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col18a1P39061 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC6.36□□□□□ -1.39
Col18a1P39061 Gm6982-201ENSMUST00000118752 1560 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC6.36□□□□□ -1.39
Col18a1P39061 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC6.36□□□□□ -1.39
Col18a1P39061 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC6.36□□□□□ -1.39
Col18a1P39061 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Col18a1P39061 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col18a1P39061 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col18a1P39061 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col18a1P39061 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col18a1P39061 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col18a1P39061 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Col18a1P39061 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col18a1P39061 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
Col18a1P39061 Gm14711-201ENSMUST00000117056 217 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Gm14600-201ENSMUST00000121032 630 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC6.36□□□□□ -1.39
Col18a1P39061 Gm26000-201ENSMUST00000157991 107 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Gm26404-201ENSMUST00000158498 109 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col18a1P39061 Gm17177-201ENSMUST00000169144 483 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Col18a1P39061 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Gm27940-201ENSMUST00000184449 98 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Gm28779-201ENSMUST00000189678 323 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Gm19774-201ENSMUST00000190667 114 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Gm17967-201ENSMUST00000195319 647 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Gm8209-201ENSMUST00000206386 553 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Gm45523-201ENSMUST00000210712 799 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Col18a1P39061 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Col18a1P39061 Gm37183-201ENSMUST00000191712 3405 ntBASIC6.36□□□□□ -1.39
Col18a1P39061 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC6.35□□□□□ -1.39
Col18a1P39061 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col18a1P39061 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col18a1P39061 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Col18a1P39061 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Col18a1P39061 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Col18a1P39061 Gm26156-201ENSMUST00000116999 123 ntBASIC6.35□□□□□ -1.39
Col18a1P39061 Gm15012-201ENSMUST00000119176 106 ntBASIC6.35□□□□□ -1.39
Col18a1P39061 Gm14784-201ENSMUST00000121604 663 ntBASIC6.35□□□□□ -1.39
Col18a1P39061 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC6.35□□□□□ -1.39
Col18a1P39061 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC6.35□□□□□ -1.39
Col18a1P39061 Gm25817-201ENSMUST00000177758 121 ntBASIC6.35□□□□□ -1.39
Col18a1P39061 Gm24766-201ENSMUST00000179182 121 ntBASIC6.35□□□□□ -1.39
Col18a1P39061 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC6.35□□□□□ -1.39
Col18a1P39061 Gm45508-201ENSMUST00000209298 299 ntBASIC6.35□□□□□ -1.39
Col18a1P39061 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Col18a1P39061 AC153971.2-201ENSMUST00000214553 777 ntBASIC6.35□□□□□ -1.39
Col18a1P39061 Gm18252-203ENSMUST00000215855 757 ntBASIC6.35□□□□□ -1.39
Col18a1P39061 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col18a1P39061 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC6.35□□□□□ -1.39
Col18a1P39061 Gm26111-201ENSMUST00000083969 106 ntBASIC6.35□□□□□ -1.39
Col18a1P39061 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC6.35□□□□□ -1.39
Col18a1P39061 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC6.35□□□□□ -1.39
Col18a1P39061 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC6.35□□□□□ -1.39
Col18a1P39061 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Col18a1P39061 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Col18a1P39061 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col18a1P39061 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Col18a1P39061 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col18a1P39061 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Col18a1P39061 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col18a1P39061 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms