Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col2a1P28481 Fus-202ENSMUST00000079045 2623 ntBASIC4.52□□□□□ -1.69
Col2a1P28481 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col2a1P28481 Gm22497-201ENSMUST00000104499 131 ntBASIC4.52□□□□□ -1.69
Col2a1P28481 Gm11372-201ENSMUST00000117348 570 ntBASIC4.52□□□□□ -1.69
Col2a1P28481 Gm22859-201ENSMUST00000174978 122 ntBASIC4.52□□□□□ -1.69
Col2a1P28481 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col2a1P28481 Gm42983-201ENSMUST00000199879 815 ntBASIC4.52□□□□□ -1.69
Col2a1P28481 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col2a1P28481 Gm6303-201ENSMUST00000210123 471 ntBASIC4.52□□□□□ -1.69
Col2a1P28481 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col2a1P28481 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col2a1P28481 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Col2a1P28481 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC4.52□□□□□ -1.69
Col2a1P28481 Gm45149-201ENSMUST00000206459 2172 ntBASIC4.52□□□□□ -1.69
Col2a1P28481 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Col2a1P28481 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col2a1P28481 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.52□□□□□ -1.69
Col2a1P28481 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Col2a1P28481 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col2a1P28481 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col2a1P28481 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col2a1P28481 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col2a1P28481 Gm12379-201ENSMUST00000119607 391 ntBASIC4.51□□□□□ -1.69
Col2a1P28481 Gm14991-201ENSMUST00000119913 598 ntBASIC4.51□□□□□ -1.69
Col2a1P28481 Gm25436-201ENSMUST00000158275 145 ntBASIC4.51□□□□□ -1.69
Col2a1P28481 Gm16566-201ENSMUST00000160387 910 ntBASIC4.51□□□□□ -1.69
Col2a1P28481 Gm28064-201ENSMUST00000185639 858 ntBASIC4.51□□□□□ -1.69
Col2a1P28481 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC4.51□□□□□ -1.69
Col2a1P28481 AC134333.1-201ENSMUST00000204536 944 ntBASIC4.51□□□□□ -1.69
Col2a1P28481 Gm3829-201ENSMUST00000222362 619 ntBASIC4.51□□□□□ -1.69
Col2a1P28481 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.51□□□□□ -1.69
Col2a1P28481 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col2a1P28481 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col2a1P28481 Gm5265-201ENSMUST00000076828 342 ntBASIC4.51□□□□□ -1.69
Col2a1P28481 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col2a1P28481 Gm37999-201ENSMUST00000195178 1809 ntBASIC4.51□□□□□ -1.69
Col2a1P28481 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col2a1P28481 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Col2a1P28481 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col2a1P28481 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col2a1P28481 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col2a1P28481 Gm43883-201ENSMUST00000204002 3750 ntBASIC4.5□□□□□ -1.69
Col2a1P28481 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Col2a1P28481 Gm24376-201ENSMUST00000104399 127 ntBASIC4.5□□□□□ -1.69
Col2a1P28481 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Col2a1P28481 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC4.5□□□□□ -1.69
Col2a1P28481 Gm11829-201ENSMUST00000121003 282 ntBASIC4.5□□□□□ -1.69
Col2a1P28481 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC4.5□□□□□ -1.69
Col2a1P28481 Gm3160-201ENSMUST00000128343 607 ntBASIC4.5□□□□□ -1.69
Col2a1P28481 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.5□□□□□ -1.69
Col2a1P28481 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.5□□□□□ -1.69
Col2a1P28481 Gm21617-201ENSMUST00000188297 691 ntBASIC4.5□□□□□ -1.69
Col2a1P28481 Gm18352-201ENSMUST00000189113 902 ntBASIC4.5□□□□□ -1.69
Col2a1P28481 Gm37164-201ENSMUST00000192809 637 ntBASIC4.5□□□□□ -1.69
Col2a1P28481 Gm45379-201ENSMUST00000211772 549 ntBASIC4.5□□□□□ -1.69
Col2a1P28481 Gm18120-201ENSMUST00000220079 511 ntBASIC4.5□□□□□ -1.69
Col2a1P28481 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.5□□□□□ -1.69
Col2a1P28481 Snora7a-201ENSMUST00000082629 140 ntBASIC4.5□□□□□ -1.69
Col2a1P28481 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Col2a1P28481 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.5□□□□□ -1.69
Col2a1P28481 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Col2a1P28481 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Col2a1P28481 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.5□□□□□ -1.69
Col2a1P28481 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Col2a1P28481 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.5□□□□□ -1.69
Col2a1P28481 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Col2a1P28481 Gm37456-201ENSMUST00000193176 5837 ntBASIC4.5□□□□□ -1.69
Col2a1P28481 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Col2a1P28481 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Col2a1P28481 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Col2a1P28481 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Col2a1P28481 Gm14687-201ENSMUST00000120206 363 ntBASIC4.49□□□□□ -1.69
Col2a1P28481 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Col2a1P28481 Gm24441-201ENSMUST00000157235 281 ntBASIC4.49□□□□□ -1.69
Col2a1P28481 Gm22219-201ENSMUST00000157562 319 ntBASIC4.49□□□□□ -1.69
Col2a1P28481 Gm25066-201ENSMUST00000158145 123 ntBASIC4.49□□□□□ -1.69
Col2a1P28481 Gm44371-201ENSMUST00000204148 467 ntBASIC4.49□□□□□ -1.69
Col2a1P28481 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC4.49□□□□□ -1.69
Col2a1P28481 AC139638.1-201ENSMUST00000218027 364 ntBASIC4.49□□□□□ -1.69
Col2a1P28481 CU024892.1-201ENSMUST00000224869 515 ntBASIC4.49□□□□□ -1.69
Col2a1P28481 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Col2a1P28481 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Col2a1P28481 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Col2a1P28481 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC4.49□□□□□ -1.69
Col2a1P28481 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Col2a1P28481 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Col2a1P28481 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Col2a1P28481 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Col2a1P28481 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Col2a1P28481 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.49□□□□□ -1.69
Col2a1P28481 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
Col2a1P28481 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Col2a1P28481 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Col2a1P28481 Gm24127-201ENSMUST00000104110 130 ntBASIC4.49□□□□□ -1.69
Col2a1P28481 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Col2a1P28481 Gm24314-201ENSMUST00000158274 123 ntBASIC4.49□□□□□ -1.69
Col2a1P28481 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Col2a1P28481 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Col2a1P28481 Gm26556-201ENSMUST00000180645 320 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms