Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Retreg3Q9CQV4 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retreg3Q9CQV4 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retreg3Q9CQV4 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retreg3Q9CQV4 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Retreg3Q9CQV4 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retreg3Q9CQV4 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Retreg3Q9CQV4 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Retreg3Q9CQV4 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.73□□□□□ -1.33
Retreg3Q9CQV4 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.73□□□□□ -1.33
Retreg3Q9CQV4 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Snord88a-201ENSMUST00000116723 90 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Gm12285-201ENSMUST00000117347 233 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Gm12486-201ENSMUST00000120887 541 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Gm12778-201ENSMUST00000122341 333 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Gm25920-201ENSMUST00000158307 99 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Gm5456-201ENSMUST00000170706 844 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Gm20454-201ENSMUST00000172713 221 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Gm23968-201ENSMUST00000175047 125 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Rps12l1-201ENSMUST00000183090 399 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Gm27997-201ENSMUST00000184942 69 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Gm28860-201ENSMUST00000188103 313 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Gm28846-201ENSMUST00000189161 368 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Gm17988-201ENSMUST00000208796 535 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 AC140477.1-201ENSMUST00000222354 246 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 AC123860.1-201ENSMUST00000228033 481 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Gm37642-201ENSMUST00000193166 1735 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Gm37268-201ENSMUST00000192254 2614 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Gm43374-201ENSMUST00000202498 2391 ntBASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retreg3Q9CQV4 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Retreg3Q9CQV4 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Retreg3Q9CQV4 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Retreg3Q9CQV4 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Retreg3Q9CQV4 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Retreg3Q9CQV4 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Retreg3Q9CQV4 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Retreg3Q9CQV4 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Retreg3Q9CQV4 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Retreg3Q9CQV4 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Retreg3Q9CQV4 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.34
Retreg3Q9CQV4 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Retreg3Q9CQV4 Gm26079-201ENSMUST00000104066 133 ntBASIC6.71□□□□□ -1.34
Retreg3Q9CQV4 Gm13664-201ENSMUST00000117304 345 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms