Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm13743-201ENSMUST00000121486 724 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm14848-201ENSMUST00000121850 467 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm14413-201ENSMUST00000122158 408 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm4487-201ENSMUST00000150617 442 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm24532-201ENSMUST00000157951 286 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm3091-201ENSMUST00000163408 484 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm5263-201ENSMUST00000163646 601 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm27541-201ENSMUST00000184078 122 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm29576-201ENSMUST00000188020 678 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm29284-201ENSMUST00000188363 255 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm28354-201ENSMUST00000190904 678 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm10048-201ENSMUST00000194196 372 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm38670-201ENSMUST00000199248 77 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm43440-201ENSMUST00000201957 729 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm9038-201ENSMUST00000203400 604 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm8774-201ENSMUST00000203621 692 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm8999-201ENSMUST00000204951 969 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm45777-201ENSMUST00000213009 301 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm23508-201ENSMUST00000083079 72 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm37625-201ENSMUST00000194969 4872 ntBASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ccdc9Q8VC31 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm42551-201ENSMUST00000197701 1573 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm23750-201ENSMUST00000104222 132 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm11550-201ENSMUST00000118210 699 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm3943-201ENSMUST00000118606 718 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm9078-201ENSMUST00000119126 617 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm13788-201ENSMUST00000120767 601 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm13533-201ENSMUST00000121104 177 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm24925-201ENSMUST00000178157 107 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm8321-201ENSMUST00000181691 980 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm27033-201ENSMUST00000183226 544 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm20819-201ENSMUST00000191091 925 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm37433-201ENSMUST00000192695 678 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm37441-201ENSMUST00000194430 678 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm43245-201ENSMUST00000197603 468 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm45874-201ENSMUST00000212423 346 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm7119-201ENSMUST00000221345 695 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 AC192616.1-201ENSMUST00000221922 132 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Platr25-208ENSMUST00000222602 939 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 AC139294.2-201ENSMUST00000227159 285 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm37397-201ENSMUST00000194579 2842 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 AC169038.1-201ENSMUST00000227378 1352 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 CT010444.1-201ENSMUST00000219963 3845 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm18493-201ENSMUST00000192084 1612 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Gm44542-201ENSMUST00000208677 4314 ntBASIC5.52□□□□□ -1.53
Ccdc9Q8VC31 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.51□□□□□ -1.53
Ccdc9Q8VC31 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms