Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm14619-201ENSMUST00000120480 168 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm13162-201ENSMUST00000121481 454 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 Hba-ps4-201ENSMUST00000128900 447 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 Magea9-ps-201ENSMUST00000140655 732 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm22870-201ENSMUST00000157501 112 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm23534-201ENSMUST00000157539 97 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm22312-201ENSMUST00000158005 130 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CopaQ8CIE6 Magea9-ps-202ENSMUST00000167328 899 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm25944-201ENSMUST00000178758 94 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm29610-201ENSMUST00000187749 453 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm19214-201ENSMUST00000191956 1083 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm7897-201ENSMUST00000193981 554 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm38008-201ENSMUST00000195333 518 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm36954-201ENSMUST00000195362 363 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm2607-201ENSMUST00000212389 627 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 AC132918.1-201ENSMUST00000227877 925 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CopaQ8CIE6 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CopaQ8CIE6 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CopaQ8CIE6 Gm23626-201ENSMUST00000082458 133 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CopaQ8CIE6 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CopaQ8CIE6 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CopaQ8CIE6 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CopaQ8CIE6 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.06□□□□□ -1.6
CopaQ8CIE6 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CopaQ8CIE6 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CopaQ8CIE6 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CopaQ8CIE6 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm13230-201ENSMUST00000120870 1575 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm16128-201ENSMUST00000117855 626 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm24944-201ENSMUST00000158330 128 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm15974-201ENSMUST00000159103 531 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm26933-201ENSMUST00000182320 827 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm27036-201ENSMUST00000182465 980 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm28385-201ENSMUST00000185671 292 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm28437-201ENSMUST00000190277 783 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm37288-201ENSMUST00000193963 334 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm10048-201ENSMUST00000194196 372 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm9632-201ENSMUST00000195934 643 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm43524-201ENSMUST00000197278 298 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm5660-201ENSMUST00000197453 1149 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm42579-201ENSMUST00000200512 734 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 AC120011.1-201ENSMUST00000202147 744 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm32453-201ENSMUST00000204183 456 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm44727-201ENSMUST00000204225 451 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm6906-201ENSMUST00000218014 569 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm46234-201ENSMUST00000218702 259 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm19599-201ENSMUST00000218898 358 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm6171-201ENSMUST00000220760 645 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm9512-201ENSMUST00000223112 497 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 AC137871.2-201ENSMUST00000226482 289 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 AC154484.1-201ENSMUST00000227311 771 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm23796-201ENSMUST00000084011 160 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms