Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm17412-201ENSMUST00000179261 468 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm25942-201ENSMUST00000180080 110 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm29228-201ENSMUST00000185489 418 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm37183-201ENSMUST00000191712 3405 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm43793-201ENSMUST00000201645 1333 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm45590-201ENSMUST00000209715 262 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm18850-201ENSMUST00000211578 388 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 AC166358.7-201ENSMUST00000221132 108 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 AC125543.5-201ENSMUST00000222799 108 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm46389-201ENSMUST00000223199 392 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm22572-201ENSMUST00000082985 105 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm24457-201ENSMUST00000083196 105 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.63□□□□□ -1.35
Trim47Q8C0E3 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm37311-201ENSMUST00000195541 2024 ntBASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm8761-201ENSMUST00000121507 955 ntBASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Ear-ps5-201ENSMUST00000164700 463 ntBASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm17528-201ENSMUST00000171026 239 ntBASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Mir5106-201ENSMUST00000174936 73 ntBASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm24561-201ENSMUST00000175182 95 ntBASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm24957-201ENSMUST00000179604 132 ntBASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC6.62□□□□□ -1.35
Trim47Q8C0E3 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm28974-201ENSMUST00000187893 231 ntBASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm18444-201ENSMUST00000191239 629 ntBASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm43945-201ENSMUST00000203595 754 ntBASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm44611-201ENSMUST00000207507 355 ntBASIC6.62□□□□□ -1.35
Trim47Q8C0E3 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 AC126554.1-201ENSMUST00000222161 271 ntBASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm20102-201ENSMUST00000222445 220 ntBASIC6.62□□□□□ -1.35
Trim47Q8C0E3 AC165092.3-201ENSMUST00000223602 282 ntBASIC6.62□□□□□ -1.35
Trim47Q8C0E3 AC124709.3-201ENSMUST00000227294 171 ntBASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm23737-201ENSMUST00000082547 159 ntBASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Mir298-201ENSMUST00000083476 82 ntBASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Gm43886-201ENSMUST00000205039 2386 ntBASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 107.6 ms