Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm38090-201ENSMUST00000195733 1942 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.87□□□□□ -1.63
Ubfd1Q78JW9 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 AC116797.2-201ENSMUST00000224763 4221 ntBASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm15227-201ENSMUST00000121844 399 ntBASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm24628-201ENSMUST00000122761 289 ntBASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm16060-201ENSMUST00000153140 478 ntBASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm3339-201ENSMUST00000163462 475 ntBASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm9294-201ENSMUST00000165198 789 ntBASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm43309-201ENSMUST00000200837 458 ntBASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm43810-201ENSMUST00000201018 232 ntBASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm32308-201ENSMUST00000203053 280 ntBASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm45658-201ENSMUST00000209197 580 ntBASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm45690-201ENSMUST00000210775 246 ntBASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 AC138284.2-201ENSMUST00000213982 567 ntBASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 AC168059.2-201ENSMUST00000224473 333 ntBASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 CT009600.2-201ENSMUST00000226638 481 ntBASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 AC112142.1-206ENSMUST00000228136 982 ntBASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Snord59a-201ENSMUST00000082844 74 ntBASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm6645-201ENSMUST00000118505 2726 ntBASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Gm37606-201ENSMUST00000191816 3116 ntBASIC4.86□□□□□ -1.63
Ubfd1Q78JW9 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 AC144772.1-201ENSMUST00000226372 2398 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm22020-201ENSMUST00000104358 136 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm22899-201ENSMUST00000104540 131 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm14711-201ENSMUST00000117056 217 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm15560-201ENSMUST00000117107 643 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm8858-201ENSMUST00000118259 342 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm16463-201ENSMUST00000120527 721 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm24188-201ENSMUST00000157980 108 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm26404-201ENSMUST00000158498 109 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 S100a11-ps-201ENSMUST00000181735 306 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm26993-201ENSMUST00000182766 789 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm2950-201ENSMUST00000185530 520 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm18117-201ENSMUST00000187720 742 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm9687-201ENSMUST00000189312 602 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm10292-202ENSMUST00000193165 585 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm42539-201ENSMUST00000197009 308 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms