Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm16179-201ENSMUST00000120685 373 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm9225-201ENSMUST00000121921 836 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm23279-201ENSMUST00000157912 97 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm22261-201ENSMUST00000158691 324 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Ear-ps12-201ENSMUST00000161720 451 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm24957-201ENSMUST00000179604 132 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm14596-201ENSMUST00000180268 537 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm25873-201ENSMUST00000180317 107 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm14595-201ENSMUST00000180335 537 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm27803-201ENSMUST00000183763 119 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm8296-201ENSMUST00000185597 524 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm17916-202ENSMUST00000187634 1187 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm43494-201ENSMUST00000197672 388 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm45508-201ENSMUST00000209298 299 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm3442-201ENSMUST00000216808 710 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm24041-201ENSMUST00000083115 156 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm23456-201ENSMUST00000083335 137 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm38388-201ENSMUST00000195569 1430 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Gm5512-201ENSMUST00000218013 1353 ntBASIC5.8□□□□□ -1.48
Sh3rf1Q69ZI1 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm24935-201ENSMUST00000103770 110 ntBASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm11447-201ENSMUST00000118983 858 ntBASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm12186-201ENSMUST00000119050 945 ntBASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm6744-201ENSMUST00000119303 543 ntBASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm13430-201ENSMUST00000121366 288 ntBASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Defa-ps12-201ENSMUST00000122353 193 ntBASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm22724-201ENSMUST00000158091 127 ntBASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm17511-201ENSMUST00000172206 342 ntBASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm20480-201ENSMUST00000173953 250 ntBASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Mir6992-201ENSMUST00000183342 109 ntBASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm27999-201ENSMUST00000183539 193 ntBASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm45063-201ENSMUST00000203726 472 ntBASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Gm45727-201ENSMUST00000212886 572 ntBASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 AC105407.3-201ENSMUST00000224161 648 ntBASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 AC192333.6-201ENSMUST00000224565 725 ntBASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 AC154640.2-201ENSMUST00000226324 472 ntBASIC5.79□□□□□ -1.48
Sh3rf1Q69ZI1 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms