Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC4.71□□□□□ -1.65
Ccdc88aQ5SNZ0 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.71□□□□□ -1.65
Ccdc88aQ5SNZ0 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.71□□□□□ -1.65
Ccdc88aQ5SNZ0 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Ccdc88aQ5SNZ0 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm24318-201ENSMUST00000104490 131 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm13924-201ENSMUST00000119899 486 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm25369-201ENSMUST00000158848 132 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm29161-201ENSMUST00000188250 699 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm28396-201ENSMUST00000190309 379 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Trbv28-201ENSMUST00000192804 264 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm17954-201ENSMUST00000195893 607 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm43028-201ENSMUST00000202561 481 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm11393-201ENSMUST00000118019 288 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm22320-201ENSMUST00000157149 312 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm24402-201ENSMUST00000157873 91 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm16026-202ENSMUST00000159695 772 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm36943-201ENSMUST00000194422 282 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm6057-201ENSMUST00000195927 314 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm7587-201ENSMUST00000207618 1021 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Mir215-201ENSMUST00000083628 112 ntBASIC4.71□□□□□ -1.66
Ccdc88aQ5SNZ0 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm14605-201ENSMUST00000120599 268 ntBASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm7618-201ENSMUST00000121643 171 ntBASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm18342-201ENSMUST00000186987 694 ntBASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm5265-201ENSMUST00000076828 342 ntBASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm22936-201ENSMUST00000103955 126 ntBASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm23271-201ENSMUST00000104052 124 ntBASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm25177-201ENSMUST00000122634 117 ntBASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm22968-201ENSMUST00000157955 118 ntBASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm43424-201ENSMUST00000200484 253 ntBASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm19908-201ENSMUST00000204684 391 ntBASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm15916-201ENSMUST00000118355 736 ntBASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm12458-201ENSMUST00000119387 495 ntBASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm12087-201ENSMUST00000121878 258 ntBASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.69□□□□□ -1.66
Ccdc88aQ5SNZ0 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms