Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm44584-201ENSMUST00000208395 2880 ntBASIC5.38□□□□□ -1.55
SgcbP82349 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SgcbP82349 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SgcbP82349 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SgcbP82349 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC5.38□□□□□ -1.55
SgcbP82349 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
SgcbP82349 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SgcbP82349 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SgcbP82349 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SgcbP82349 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC5.38□□□□□ -1.55
SgcbP82349 Gm42755-201ENSMUST00000198533 1493 ntBASIC5.38□□□□□ -1.55
SgcbP82349 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SgcbP82349 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SgcbP82349 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SgcbP82349 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SgcbP82349 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SgcbP82349 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SgcbP82349 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SgcbP82349 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SgcbP82349 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SgcbP82349 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SgcbP82349 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SgcbP82349 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SgcbP82349 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SgcbP82349 Gm44679-201ENSMUST00000207202 2908 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SgcbP82349 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SgcbP82349 Gm12765-201ENSMUST00000117273 615 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Gm11346-201ENSMUST00000118346 704 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Gm14669-201ENSMUST00000118841 250 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Gm12890-201ENSMUST00000120885 373 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC5.37□□□□□ -1.55
SgcbP82349 Gm4660-201ENSMUST00000131499 403 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SgcbP82349 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.37□□□□□ -1.55
SgcbP82349 Mir3066-201ENSMUST00000175296 83 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Gm8941-201ENSMUST00000181451 899 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Gm8816-201ENSMUST00000182280 1163 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Mir6992-201ENSMUST00000183342 109 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Gm27210-201ENSMUST00000184263 402 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Gm27653-201ENSMUST00000185037 136 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Mir6361-201ENSMUST00000185079 101 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Gm29385-201ENSMUST00000186831 363 ntBASIC5.37□□□□□ -1.55
SgcbP82349 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SgcbP82349 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC5.37□□□□□ -1.55
SgcbP82349 Gm2287-202ENSMUST00000199619 1000 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Gm29793-201ENSMUST00000202874 460 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Gm43105-201ENSMUST00000202987 459 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC5.37□□□□□ -1.55
SgcbP82349 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
SgcbP82349 Gm19900-201ENSMUST00000207285 576 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Gm44571-201ENSMUST00000208092 533 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Gm45710-201ENSMUST00000212847 215 ntBASIC5.37□□□□□ -1.55
SgcbP82349 CT030187.1-201ENSMUST00000220605 252 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Gm18405-201ENSMUST00000220743 511 ntBASIC5.37□□□□□ -1.55
SgcbP82349 AC156559.1-201ENSMUST00000224158 222 ntBASIC5.37□□□□□ -1.55
SgcbP82349 AC158142.1-201ENSMUST00000226721 416 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SgcbP82349 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
SgcbP82349 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SgcbP82349 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SgcbP82349 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC5.37□□□□□ -1.55
SgcbP82349 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC5.37□□□□□ -1.55
SgcbP82349 AC125532.1-201ENSMUST00000216210 2334 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SgcbP82349 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Gm37894-201ENSMUST00000195416 2599 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SgcbP82349 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SgcbP82349 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SgcbP82349 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SgcbP82349 Gm37195-201ENSMUST00000192006 3018 ntBASIC5.37□□□□□ -1.55
SgcbP82349 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SgcbP82349 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SgcbP82349 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
SgcbP82349 Gm42894-201ENSMUST00000200788 3390 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SgcbP82349 Gm37064-201ENSMUST00000193851 2231 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SgcbP82349 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SgcbP82349 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SgcbP82349 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SgcbP82349 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SgcbP82349 Gm23739-201ENSMUST00000102295 108 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SgcbP82349 Gm23744-201ENSMUST00000104231 149 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Gm14359-201ENSMUST00000118883 424 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SgcbP82349 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC5.36□□□□□ -1.55
SgcbP82349 Gm25339-201ENSMUST00000157458 232 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Snora47-201ENSMUST00000157483 138 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Gm22085-201ENSMUST00000158344 110 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Gm25902-201ENSMUST00000158493 318 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Gm7925-201ENSMUST00000166690 401 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms