Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col18a1P39061 AC149294.7-201ENSMUST00000227475 1432 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col18a1P39061 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.39□□□□□ -1.39
Col18a1P39061 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.39□□□□□ -1.39
Col18a1P39061 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col18a1P39061 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col18a1P39061 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col18a1P39061 Gm12693-201ENSMUST00000121965 483 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Gm22226-201ENSMUST00000157355 109 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Gm24225-201ENSMUST00000158825 98 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Gm21754-201ENSMUST00000177550 479 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Gm21638-201ENSMUST00000179473 836 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC6.39□□□□□ -1.39
Col18a1P39061 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col18a1P39061 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col18a1P39061 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC6.39□□□□□ -1.39
Col18a1P39061 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC6.39□□□□□ -1.39
Col18a1P39061 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC6.39□□□□□ -1.39
Col18a1P39061 AC156803.1-201ENSMUST00000224407 820 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 CT030662.2-201ENSMUST00000226942 805 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col18a1P39061 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Col18a1P39061 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Col18a1P39061 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col18a1P39061 Gm5182-201ENSMUST00000217708 6092 ntBASIC6.38□□□□□ -1.39
Col18a1P39061 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Col18a1P39061 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Col18a1P39061 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col18a1P39061 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col18a1P39061 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Col18a1P39061 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC6.38□□□□□ -1.39
Col18a1P39061 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col18a1P39061 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Col18a1P39061 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Col18a1P39061 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col18a1P39061 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col18a1P39061 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col18a1P39061 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.38□□□□□ -1.39
Col18a1P39061 Gm13650-201ENSMUST00000117729 433 ntBASIC6.38□□□□□ -1.39
Col18a1P39061 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC6.38□□□□□ -1.39
Col18a1P39061 Gm22452-201ENSMUST00000122804 104 ntBASIC6.38□□□□□ -1.39
Col18a1P39061 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC6.38□□□□□ -1.39
Col18a1P39061 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC6.38□□□□□ -1.39
Col18a1P39061 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col18a1P39061 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col18a1P39061 Gm24198-201ENSMUST00000157812 108 ntBASIC6.38□□□□□ -1.39
Col18a1P39061 Gm24224-201ENSMUST00000158828 258 ntBASIC6.38□□□□□ -1.39
Col18a1P39061 Mir713-201ENSMUST00000178651 108 ntBASIC6.38□□□□□ -1.39
Col18a1P39061 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col18a1P39061 Trbv24-201ENSMUST00000194614 347 ntBASIC6.38□□□□□ -1.39
Col18a1P39061 Gm37719-201ENSMUST00000194615 292 ntBASIC6.38□□□□□ -1.39
Col18a1P39061 Gm29817-201ENSMUST00000210098 172 ntBASIC6.38□□□□□ -1.39
Col18a1P39061 Gm45343-201ENSMUST00000210452 828 ntBASIC6.38□□□□□ -1.39
Col18a1P39061 Gm45247-201ENSMUST00000210757 309 ntBASIC6.38□□□□□ -1.39
Col18a1P39061 Gm7495-201ENSMUST00000215099 426 ntBASIC6.38□□□□□ -1.39
Col18a1P39061 AC079644.1-201ENSMUST00000220586 405 ntBASIC6.38□□□□□ -1.39
Col18a1P39061 AC154738.5-201ENSMUST00000227397 310 ntBASIC6.38□□□□□ -1.39
Col18a1P39061 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col18a1P39061 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col18a1P39061 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col18a1P39061 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col18a1P39061 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col18a1P39061 Gm43085-201ENSMUST00000202859 3132 ntBASIC6.38□□□□□ -1.39
Col18a1P39061 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col18a1P39061 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col18a1P39061 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Col18a1P39061 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Col18a1P39061 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Col18a1P39061 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.37□□□□□ -1.39
Col18a1P39061 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
Col18a1P39061 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Col18a1P39061 Gm43871-201ENSMUST00000204931 1955 ntBASIC6.37□□□□□ -1.39
Col18a1P39061 Gm12814-201ENSMUST00000117091 846 ntBASIC6.37□□□□□ -1.39
Col18a1P39061 Gm14269-201ENSMUST00000120455 306 ntBASIC6.37□□□□□ -1.39
Col18a1P39061 Gm24840-201ENSMUST00000122603 147 ntBASIC6.37□□□□□ -1.39
Col18a1P39061 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC6.37□□□□□ -1.39
Col18a1P39061 Gm23587-201ENSMUST00000157658 84 ntBASIC6.37□□□□□ -1.39
Col18a1P39061 Gm23638-201ENSMUST00000175073 126 ntBASIC6.37□□□□□ -1.39
Col18a1P39061 Gm23158-201ENSMUST00000175076 126 ntBASIC6.37□□□□□ -1.39
Col18a1P39061 Gm22907-201ENSMUST00000175198 126 ntBASIC6.37□□□□□ -1.39
Col18a1P39061 Gm22625-201ENSMUST00000175382 126 ntBASIC6.37□□□□□ -1.39
Col18a1P39061 Gm22875-201ENSMUST00000175449 126 ntBASIC6.37□□□□□ -1.39
Col18a1P39061 Gm25197-201ENSMUST00000175516 126 ntBASIC6.37□□□□□ -1.39
Col18a1P39061 Gm27857-201ENSMUST00000176930 126 ntBASIC6.37□□□□□ -1.39
Col18a1P39061 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC6.37□□□□□ -1.39
Col18a1P39061 Gm26268-201ENSMUST00000177685 126 ntBASIC6.37□□□□□ -1.39
Col18a1P39061 Gm23681-201ENSMUST00000178821 126 ntBASIC6.37□□□□□ -1.39
Col18a1P39061 Gm28639-201ENSMUST00000191519 481 ntBASIC6.37□□□□□ -1.39
Col18a1P39061 Gm37550-201ENSMUST00000193230 463 ntBASIC6.37□□□□□ -1.39
Col18a1P39061 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col18a1P39061 Igkv12-40-201ENSMUST00000199208 347 ntBASIC6.37□□□□□ -1.39
Col18a1P39061 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC6.37□□□□□ -1.39
Col18a1P39061 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Col18a1P39061 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col18a1P39061 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col18a1P39061 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Col18a1P39061 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms