Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col1a1P11087 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.69□□□□□ -1.66
Col1a1P11087 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col1a1P11087 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.69□□□□□ -1.66
Col1a1P11087 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col1a1P11087 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Col1a1P11087 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col1a1P11087 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col1a1P11087 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col1a1P11087 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col1a1P11087 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col1a1P11087 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.69□□□□□ -1.66
Col1a1P11087 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col1a1P11087 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col1a1P11087 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.69□□□□□ -1.66
Col1a1P11087 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col1a1P11087 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col1a1P11087 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Col1a1P11087 Gm25168-201ENSMUST00000104189 132 ntBASIC4.69□□□□□ -1.66
Col1a1P11087 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.69□□□□□ -1.66
Col1a1P11087 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col1a1P11087 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col1a1P11087 Gm27828-201ENSMUST00000184108 119 ntBASIC4.69□□□□□ -1.66
Col1a1P11087 Gm5066-201ENSMUST00000188479 822 ntBASIC4.69□□□□□ -1.66
Col1a1P11087 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.69□□□□□ -1.66
Col1a1P11087 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.69□□□□□ -1.66
Col1a1P11087 Gm36964-201ENSMUST00000191876 198 ntBASIC4.69□□□□□ -1.66
Col1a1P11087 Ighv1-28-201ENSMUST00000192987 351 ntBASIC4.69□□□□□ -1.66
Col1a1P11087 Gm9722-201ENSMUST00000194568 802 ntBASIC4.69□□□□□ -1.66
Col1a1P11087 Gm17954-201ENSMUST00000195893 607 ntBASIC4.69□□□□□ -1.66
Col1a1P11087 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.69□□□□□ -1.66
Col1a1P11087 Gm45420-201ENSMUST00000211243 425 ntBASIC4.69□□□□□ -1.66
Col1a1P11087 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.69□□□□□ -1.66
Col1a1P11087 Gm3565-201ENSMUST00000222670 609 ntBASIC4.69□□□□□ -1.66
Col1a1P11087 AC130547.1-201ENSMUST00000228079 1047 ntBASIC4.69□□□□□ -1.66
Col1a1P11087 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col1a1P11087 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col1a1P11087 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col1a1P11087 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.69□□□□□ -1.66
Col1a1P11087 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col1a1P11087 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col1a1P11087 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.68□□□□□ -1.66
Col1a1P11087 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col1a1P11087 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col1a1P11087 Gm4991-201ENSMUST00000118899 1552 ntBASIC4.68□□□□□ -1.66
Col1a1P11087 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col1a1P11087 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col1a1P11087 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col1a1P11087 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col1a1P11087 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col1a1P11087 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.68□□□□□ -1.66
Col1a1P11087 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Col1a1P11087 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col1a1P11087 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Col1a1P11087 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
Col1a1P11087 Gm15613-201ENSMUST00000118396 326 ntBASIC4.68□□□□□ -1.66
Col1a1P11087 Gm11719-201ENSMUST00000119399 351 ntBASIC4.68□□□□□ -1.66
Col1a1P11087 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Col1a1P11087 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC4.68□□□□□ -1.66
Col1a1P11087 Gm44582-201ENSMUST00000209125 445 ntBASIC4.68□□□□□ -1.66
Col1a1P11087 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Col1a1P11087 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Col1a1P11087 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC4.68□□□□□ -1.66
Col1a1P11087 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col1a1P11087 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col1a1P11087 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Col1a1P11087 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col1a1P11087 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col1a1P11087 Fbxw23-202ENSMUST00000198480 1388 ntBASIC4.67□□□□□ -1.66
Col1a1P11087 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col1a1P11087 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col1a1P11087 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.67□□□□□ -1.66
Col1a1P11087 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col1a1P11087 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col1a1P11087 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col1a1P11087 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Col1a1P11087 Gm9043-201ENSMUST00000119677 314 ntBASIC4.67□□□□□ -1.66
Col1a1P11087 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col1a1P11087 Gm14383-201ENSMUST00000121637 386 ntBASIC4.67□□□□□ -1.66
Col1a1P11087 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.67□□□□□ -1.66
Col1a1P11087 Gm25066-201ENSMUST00000158145 123 ntBASIC4.67□□□□□ -1.66
Col1a1P11087 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Col1a1P11087 Gm21638-201ENSMUST00000179473 836 ntBASIC4.67□□□□□ -1.66
Col1a1P11087 Gm24520-201ENSMUST00000179510 110 ntBASIC4.67□□□□□ -1.66
Col1a1P11087 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col1a1P11087 Gm36943-201ENSMUST00000194422 282 ntBASIC4.67□□□□□ -1.66
Col1a1P11087 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.67□□□□□ -1.66
Col1a1P11087 AC151730.2-201ENSMUST00000224027 475 ntBASIC4.67□□□□□ -1.66
Col1a1P11087 Gm23927-201ENSMUST00000082466 215 ntBASIC4.67□□□□□ -1.66
Col1a1P11087 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col1a1P11087 Gm44678-201ENSMUST00000207828 2775 ntBASIC4.67□□□□□ -1.66
Col1a1P11087 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col1a1P11087 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col1a1P11087 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col1a1P11087 Gm37456-201ENSMUST00000193176 5837 ntBASIC4.67□□□□□ -1.66
Col1a1P11087 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col1a1P11087 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col1a1P11087 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Col1a1P11087 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col1a1P11087 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms