Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC3.3□□□□□ -1.88
Hmgb3O54879 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.3□□□□□ -1.88
Hmgb3O54879 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm11281-201ENSMUST00000141391 576 ntBASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm23957-201ENSMUST00000157209 90 ntBASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm23250-201ENSMUST00000157444 267 ntBASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm22158-201ENSMUST00000158411 126 ntBASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC3.3□□□□□ -1.88
Hmgb3O54879 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC3.3□□□□□ -1.88
Hmgb3O54879 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Hmgb3O54879 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm6137-201ENSMUST00000187552 578 ntBASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm38356-201ENSMUST00000194313 408 ntBASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm18382-201ENSMUST00000194394 582 ntBASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.3□□□□□ -1.88
Hmgb3O54879 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC3.3□□□□□ -1.88
Hmgb3O54879 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm46998-201ENSMUST00000221444 330 ntBASIC3.3□□□□□ -1.88
Hmgb3O54879 AC125543.1-201ENSMUST00000222778 101 ntBASIC3.3□□□□□ -1.88
Hmgb3O54879 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Hmgb3O54879 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Hmgb3O54879 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm25800-201ENSMUST00000082636 134 ntBASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm28240-201ENSMUST00000187560 2053 ntBASIC3.3□□□□□ -1.88
Hmgb3O54879 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.3□□□□□ -1.88
Hmgb3O54879 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Hmgb3O54879 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.3□□□□□ -1.88
Hmgb3O54879 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Hmgb3O54879 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Hmgb3O54879 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.3□□□□□ -1.88
Hmgb3O54879 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC3.29□□□□□ -1.88
Hmgb3O54879 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.29□□□□□ -1.88
Hmgb3O54879 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Hmgb3O54879 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Hmgb3O54879 Gm26996-201ENSMUST00000204418 1359 ntBASIC3.29□□□□□ -1.88
Hmgb3O54879 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Hmgb3O54879 Gm22020-201ENSMUST00000104358 136 ntBASIC3.29□□□□□ -1.88
Hmgb3O54879 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Hmgb3O54879 Gm23226-201ENSMUST00000116927 103 ntBASIC3.29□□□□□ -1.88
Hmgb3O54879 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC3.29□□□□□ -1.88
Hmgb3O54879 Gm15670-201ENSMUST00000117740 447 ntBASIC3.29□□□□□ -1.88
Hmgb3O54879 Gm13677-201ENSMUST00000120739 595 ntBASIC3.29□□□□□ -1.88
Hmgb3O54879 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC3.29□□□□□ -1.88
Hmgb3O54879 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.29□□□□□ -1.88
Hmgb3O54879 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC3.29□□□□□ -1.88
Hmgb3O54879 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Hmgb3O54879 Gm17177-201ENSMUST00000169144 483 ntBASIC3.29□□□□□ -1.88
Hmgb3O54879 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Hmgb3O54879 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.29□□□□□ -1.88
Hmgb3O54879 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Hmgb3O54879 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC3.29□□□□□ -1.88
Hmgb3O54879 Gm28639-201ENSMUST00000191519 481 ntBASIC3.29□□□□□ -1.88
Hmgb3O54879 Gm37241-201ENSMUST00000191736 523 ntBASIC3.29□□□□□ -1.88
Hmgb3O54879 Gm38088-201ENSMUST00000195829 241 ntBASIC3.29□□□□□ -1.88
Hmgb3O54879 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC3.29□□□□□ -1.88
Hmgb3O54879 Gm4734-201ENSMUST00000200117 777 ntBASIC3.29□□□□□ -1.88
Hmgb3O54879 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Hmgb3O54879 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.29□□□□□ -1.88
Hmgb3O54879 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC3.29□□□□□ -1.88
Hmgb3O54879 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Hmgb3O54879 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC3.29□□□□□ -1.88
Hmgb3O54879 Gm18672-201ENSMUST00000208035 270 ntBASIC3.29□□□□□ -1.88
Hmgb3O54879 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC3.29□□□□□ -1.88
Hmgb3O54879 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.29□□□□□ -1.88
Hmgb3O54879 AC099612.2-201ENSMUST00000226824 721 ntBASIC3.29□□□□□ -1.88
Hmgb3O54879 AC166574.7-201ENSMUST00000228502 704 ntBASIC3.29□□□□□ -1.88
Hmgb3O54879 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Hmgb3O54879 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Hmgb3O54879 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
Hmgb3O54879 Gm23626-201ENSMUST00000082458 133 ntBASIC3.29□□□□□ -1.88
Hmgb3O54879 Gm7381-201ENSMUST00000098958 300 ntBASIC3.29□□□□□ -1.88
Hmgb3O54879 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Hmgb3O54879 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Hmgb3O54879 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Hmgb3O54879 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Hmgb3O54879 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Hmgb3O54879 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Hmgb3O54879 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Hmgb3O54879 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm38091-201ENSMUST00000192418 3871 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Hmgb3O54879 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Hmgb3O54879 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm15385-201ENSMUST00000118725 667 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm15206-201ENSMUST00000119143 454 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm12577-201ENSMUST00000119701 574 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm14605-201ENSMUST00000120599 268 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm14908-201ENSMUST00000120930 1286 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm15905-201ENSMUST00000137042 298 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 112.5 ms