Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm21955-201ENSMUST00000194137 4968 ntBASIC3.92□□□□□ -1.78
Col6a3E9PWQ3 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Col6a3E9PWQ3 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
Col6a3E9PWQ3 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC3.92□□□□□ -1.78
Col6a3E9PWQ3 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Col6a3E9PWQ3 Mir1198-201ENSMUST00000116995 121 ntBASIC3.92□□□□□ -1.78
Col6a3E9PWQ3 Gm11971-201ENSMUST00000117715 288 ntBASIC3.92□□□□□ -1.78
Col6a3E9PWQ3 Gm11704-201ENSMUST00000120031 214 ntBASIC3.92□□□□□ -1.78
Col6a3E9PWQ3 Gm11321-201ENSMUST00000121257 902 ntBASIC3.92□□□□□ -1.78
Col6a3E9PWQ3 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC3.92□□□□□ -1.78
Col6a3E9PWQ3 Gm25436-201ENSMUST00000158275 145 ntBASIC3.92□□□□□ -1.78
Col6a3E9PWQ3 Gm8106-201ENSMUST00000213123 523 ntBASIC3.92□□□□□ -1.78
Col6a3E9PWQ3 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.92□□□□□ -1.78
Col6a3E9PWQ3 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Col6a3E9PWQ3 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col6a3E9PWQ3 Gm23615-201ENSMUST00000082602 65 ntBASIC3.92□□□□□ -1.78
Col6a3E9PWQ3 Mir34b-201ENSMUST00000083558 84 ntBASIC3.92□□□□□ -1.78
Col6a3E9PWQ3 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Col6a3E9PWQ3 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col6a3E9PWQ3 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Col6a3E9PWQ3 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Gm23867-201ENSMUST00000122649 274 ntBASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Gm22135-201ENSMUST00000158752 108 ntBASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Gm23773-201ENSMUST00000158985 296 ntBASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Gm46234-201ENSMUST00000218702 259 ntBASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Gm43065-201ENSMUST00000198971 2092 ntBASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Gm44800-201ENSMUST00000207510 1855 ntBASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Gm25595-201ENSMUST00000102273 97 ntBASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Gm16563-201ENSMUST00000162673 423 ntBASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Gm37682-201ENSMUST00000191776 522 ntBASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Gm45160-201ENSMUST00000207112 3099 ntBASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Gm35629-201ENSMUST00000209684 2241 ntBASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 CT009734.1-201ENSMUST00000227657 1687 ntBASIC3.91□□□□□ -1.78
Col6a3E9PWQ3 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Gm27592-201ENSMUST00000157729 126 ntBASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Gm22174-201ENSMUST00000175050 125 ntBASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Gm22692-201ENSMUST00000175055 125 ntBASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Gm27634-201ENSMUST00000175060 126 ntBASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Gm26460-201ENSMUST00000175061 126 ntBASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Gm22460-201ENSMUST00000175269 124 ntBASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Gm24365-201ENSMUST00000175384 125 ntBASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Gm44310-201ENSMUST00000175424 126 ntBASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Gm22639-201ENSMUST00000175591 125 ntBASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Gm24979-201ENSMUST00000178626 126 ntBASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Gm27743-201ENSMUST00000185136 126 ntBASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Gm29064-201ENSMUST00000187014 813 ntBASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Gm37085-201ENSMUST00000193780 196 ntBASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Gm23198-201ENSMUST00000158811 91 ntBASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.9□□□□□ -1.78
Col6a3E9PWQ3 Gm44894-201ENSMUST00000205280 2174 ntBASIC3.9□□□□□ -1.79
Col6a3E9PWQ3 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Col6a3E9PWQ3 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
Col6a3E9PWQ3 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
Col6a3E9PWQ3 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Col6a3E9PWQ3 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Col6a3E9PWQ3 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Col6a3E9PWQ3 Gm26273-201ENSMUST00000104180 131 ntBASIC3.9□□□□□ -1.79
Col6a3E9PWQ3 Gm15185-201ENSMUST00000117397 746 ntBASIC3.9□□□□□ -1.79
Col6a3E9PWQ3 Gm5123-201ENSMUST00000121905 837 ntBASIC3.9□□□□□ -1.79
Col6a3E9PWQ3 Gm26254-201ENSMUST00000122491 118 ntBASIC3.9□□□□□ -1.79
Col6a3E9PWQ3 Gm5755-201ENSMUST00000152394 837 ntBASIC3.9□□□□□ -1.79
Col6a3E9PWQ3 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Col6a3E9PWQ3 Gm29664-201ENSMUST00000191125 463 ntBASIC3.9□□□□□ -1.79
Col6a3E9PWQ3 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC3.9□□□□□ -1.79
Col6a3E9PWQ3 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Col6a3E9PWQ3 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms