Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Clp1Q99LI9 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Clp1Q99LI9 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Clp1Q99LI9 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.21□□□□□ -1.42
Clp1Q99LI9 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Clp1Q99LI9 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Clp1Q99LI9 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Clp1Q99LI9 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm16270-201ENSMUST00000160327 3238 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm15025-201ENSMUST00000118434 418 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm14669-201ENSMUST00000118841 250 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm11798-201ENSMUST00000119150 421 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm11623-201ENSMUST00000120176 1225 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm14915-201ENSMUST00000120747 204 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm14678-201ENSMUST00000121396 482 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 n-R5s24-201ENSMUST00000122518 117 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm23233-201ENSMUST00000157301 137 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm26354-201ENSMUST00000158221 129 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm24103-201ENSMUST00000174930 77 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm29124-201ENSMUST00000186576 452 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clp1Q99LI9 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm44319-201ENSMUST00000196974 93 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm45232-201ENSMUST00000207811 162 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm45588-201ENSMUST00000211213 630 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm18903-201ENSMUST00000215343 480 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC6.2□□□□□ -1.42
Clp1Q99LI9 AC154417.1-201ENSMUST00000223876 476 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Clp1Q99LI9 AC158142.1-201ENSMUST00000226721 416 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm44078-201ENSMUST00000204652 2646 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm18189-201ENSMUST00000218153 1951 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm37760-201ENSMUST00000194726 3841 ntBASIC6.2□□□□□ -1.42
Clp1Q99LI9 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Clp1Q99LI9 Gm38104-201ENSMUST00000195121 1895 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm44679-201ENSMUST00000207202 2908 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Clp1Q99LI9 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm20172-201ENSMUST00000193138 1551 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
Clp1Q99LI9 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 AC153494.1-201ENSMUST00000218664 3041 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm8980-201ENSMUST00000140232 2197 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm6797-201ENSMUST00000119440 512 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm22345-201ENSMUST00000122644 107 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm24225-201ENSMUST00000158825 98 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm3030-201ENSMUST00000163410 516 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm17081-201ENSMUST00000167363 478 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC6.19□□□□□ -1.42
Clp1Q99LI9 Gm22122-201ENSMUST00000175147 200 ntBASIC6.19□□□□□ -1.42
Clp1Q99LI9 Mir6539-201ENSMUST00000183732 110 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms