Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.09□□□□□ -1.76
Lsm1Q8VC85 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Lsm1Q8VC85 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Lsm1Q8VC85 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Lsm1Q8VC85 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Lsm1Q8VC85 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
Lsm1Q8VC85 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Lsm1Q8VC85 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Lsm1Q8VC85 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.76
Lsm1Q8VC85 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Lsm1Q8VC85 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm12667-201ENSMUST00000118299 1332 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm13314-201ENSMUST00000118742 335 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm9078-201ENSMUST00000119126 617 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm7421-201ENSMUST00000119298 639 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm14605-201ENSMUST00000120599 268 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm13677-201ENSMUST00000120739 595 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm7365-201ENSMUST00000120877 639 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Lsm1Q8VC85 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Lsm1Q8VC85 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm24898-201ENSMUST00000158133 106 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm25606-201ENSMUST00000158363 95 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm15796-201ENSMUST00000162135 204 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm3091-201ENSMUST00000163408 484 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Mir6374-201ENSMUST00000184003 107 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm28503-201ENSMUST00000185966 147 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm19503-201ENSMUST00000187109 241 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm18800-202ENSMUST00000188688 1105 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm28267-201ENSMUST00000191093 265 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm36954-201ENSMUST00000195362 363 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm43491-201ENSMUST00000197133 784 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm43341-201ENSMUST00000200104 1308 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm44972-201ENSMUST00000206419 406 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC4.08□□□□□ -1.76
Lsm1Q8VC85 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm46191-201ENSMUST00000218899 433 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm29774-201ENSMUST00000219270 436 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm17915-201ENSMUST00000222077 548 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Gm22826-201ENSMUST00000083774 165 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.08□□□□□ -1.76
Lsm1Q8VC85 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Lsm1Q8VC85 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Lsm1Q8VC85 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Gm4596-201ENSMUST00000117197 442 ntBASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Gm16128-201ENSMUST00000117855 626 ntBASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Gm11878-201ENSMUST00000117908 400 ntBASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Gm10444-201ENSMUST00000126708 148 ntBASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Lsm1Q8VC85 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Gm22355-201ENSMUST00000175531 96 ntBASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC4.07□□□□□ -1.76
Lsm1Q8VC85 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Gm44023-201ENSMUST00000203710 469 ntBASIC4.07□□□□□ -1.76
Lsm1Q8VC85 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Gm7045-201ENSMUST00000221466 605 ntBASIC4.07□□□□□ -1.76
Lsm1Q8VC85 AC132237.2-201ENSMUST00000221702 1209 ntBASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Lsm1Q8VC85 BC023105-201ENSMUST00000073997 1227 ntBASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Gm23464-201ENSMUST00000083145 147 ntBASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.07□□□□□ -1.76
Lsm1Q8VC85 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.06□□□□□ -1.76
Lsm1Q8VC85 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Lsm1Q8VC85 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
Lsm1Q8VC85 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Lsm1Q8VC85 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms