Protein–RNA interactions for Protein: Q6A0D4

Rftn1, Raftlin, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn1Q6A0D4 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Rftn1Q6A0D4 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Rftn1Q6A0D4 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Rftn1Q6A0D4 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC6.1□□□□□ -1.43
Rftn1Q6A0D4 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Rftn1Q6A0D4 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Rftn1Q6A0D4 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Rftn1Q6A0D4 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Rftn1Q6A0D4 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Rftn1Q6A0D4 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Rftn1Q6A0D4 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm25088-201ENSMUST00000101803 79 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm14594-201ENSMUST00000118052 537 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm14590-201ENSMUST00000118934 537 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm14520-201ENSMUST00000119258 387 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm25806-201ENSMUST00000122782 122 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm14364-201ENSMUST00000129209 267 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm24359-201ENSMUST00000158418 221 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm15970-201ENSMUST00000160623 834 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Ear-ps12-201ENSMUST00000161720 451 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm6486-201ENSMUST00000166202 434 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm25314-201ENSMUST00000178810 79 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm25412-201ENSMUST00000180258 107 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm14596-201ENSMUST00000180268 537 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm14595-201ENSMUST00000180335 537 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm28973-201ENSMUST00000189310 613 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm37743-201ENSMUST00000194645 376 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm43825-201ENSMUST00000199650 734 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm19761-201ENSMUST00000205372 391 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm45590-201ENSMUST00000209715 262 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm17737-201ENSMUST00000210183 1147 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 CT025616.1-201ENSMUST00000221158 412 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 AC160958.1-201ENSMUST00000224833 368 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 AC166369.1-201ENSMUST00000228126 351 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm24200-201ENSMUST00000082955 157 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm23096-201ENSMUST00000083447 107 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Mir188-201ENSMUST00000083464 68 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm7676-201ENSMUST00000084055 319 ntBASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Rftn1Q6A0D4 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Rftn1Q6A0D4 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Rftn1Q6A0D4 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Rftn1Q6A0D4 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
Rftn1Q6A0D4 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Gm13770-201ENSMUST00000117149 305 ntBASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Gm13650-201ENSMUST00000117729 433 ntBASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Gm14790-201ENSMUST00000117760 1293 ntBASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Gm14681-201ENSMUST00000118047 411 ntBASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Gm11862-201ENSMUST00000119678 659 ntBASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Gm12543-201ENSMUST00000120410 543 ntBASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Gm25827-201ENSMUST00000157089 107 ntBASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Gm24419-201ENSMUST00000157875 332 ntBASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Gm26866-201ENSMUST00000180414 802 ntBASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Gm26988-201ENSMUST00000183296 945 ntBASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Gm28629-201ENSMUST00000187309 263 ntBASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Npn2-202ENSMUST00000189275 235 ntBASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Gm29454-201ENSMUST00000190805 393 ntBASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Gm37774-201ENSMUST00000194401 245 ntBASIC6.08□□□□□ -1.44
Rftn1Q6A0D4 Nras-ps2-201ENSMUST00000195269 178 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms