Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 AC154727.1-201ENSMUST00000226537 499 ntBASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Ccdc88aQ5SNZ0 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ccdc88aQ5SNZ0 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.74□□□□□ -1.65
Ccdc88aQ5SNZ0 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC4.74□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm43613-201ENSMUST00000199409 1613 ntBASIC4.74□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.74□□□□□ -1.65
Ccdc88aQ5SNZ0 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Ccdc88aQ5SNZ0 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm22115-201ENSMUST00000103976 133 ntBASIC4.74□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm23923-201ENSMUST00000104108 133 ntBASIC4.74□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm6027-201ENSMUST00000121467 756 ntBASIC4.74□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.74□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm23198-201ENSMUST00000158811 91 ntBASIC4.74□□□□□ -1.65
Ccdc88aQ5SNZ0 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.74□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.74□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm43344-201ENSMUST00000198723 1229 ntBASIC4.74□□□□□ -1.65
Ccdc88aQ5SNZ0 AC159244.1-201ENSMUST00000220964 594 ntBASIC4.74□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Ccdc88aQ5SNZ0 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ccdc88aQ5SNZ0 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Ccdc88aQ5SNZ0 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.74□□□□□ -1.65
Ccdc88aQ5SNZ0 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Ccdc88aQ5SNZ0 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm24739-201ENSMUST00000158855 292 ntBASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm21045-201ENSMUST00000183058 1020 ntBASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm29598-201ENSMUST00000188996 588 ntBASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm17829-201ENSMUST00000219782 344 ntBASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm6171-201ENSMUST00000220760 645 ntBASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm11325-201ENSMUST00000119967 469 ntBASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm14065-201ENSMUST00000120848 585 ntBASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm22314-201ENSMUST00000158007 281 ntBASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Mir1251-201ENSMUST00000175486 84 ntBASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Mir6385-201ENSMUST00000184295 105 ntBASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm43341-201ENSMUST00000200104 1308 ntBASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm11718-201ENSMUST00000119942 537 ntBASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm21638-201ENSMUST00000179473 836 ntBASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm27190-201ENSMUST00000184890 542 ntBASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm45245-201ENSMUST00000210082 376 ntBASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 AC123835.1-201ENSMUST00000214362 670 ntBASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.72□□□□□ -1.65
Ccdc88aQ5SNZ0 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms