Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC6.41□□□□□ -1.38
Col18a1P39061 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC6.41□□□□□ -1.38
Col18a1P39061 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC6.41□□□□□ -1.38
Col18a1P39061 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC6.41□□□□□ -1.38
Col18a1P39061 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col18a1P39061 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col18a1P39061 Gm43327-201ENSMUST00000199285 4055 ntBASIC6.41□□□□□ -1.38
Col18a1P39061 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Col18a1P39061 Gm43665-201ENSMUST00000198672 1659 ntBASIC6.41□□□□□ -1.38
Col18a1P39061 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Col18a1P39061 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col18a1P39061 Gm6913-201ENSMUST00000100019 348 ntBASIC6.41□□□□□ -1.38
Col18a1P39061 Gm2003-201ENSMUST00000118537 636 ntBASIC6.41□□□□□ -1.38
Col18a1P39061 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC6.41□□□□□ -1.38
Col18a1P39061 Gm1989-201ENSMUST00000126244 636 ntBASIC6.41□□□□□ -1.38
Col18a1P39061 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC6.41□□□□□ -1.38
Col18a1P39061 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Col18a1P39061 Gm27773-201ENSMUST00000184087 78 ntBASIC6.41□□□□□ -1.38
Col18a1P39061 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col18a1P39061 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC6.41□□□□□ -1.38
Col18a1P39061 Gm18228-201ENSMUST00000217297 1091 ntBASIC6.41□□□□□ -1.38
Col18a1P39061 Gm18507-201ENSMUST00000218855 525 ntBASIC6.41□□□□□ -1.38
Col18a1P39061 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col18a1P39061 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC6.41□□□□□ -1.38
Col18a1P39061 AC121114.1-201ENSMUST00000228522 570 ntBASIC6.41□□□□□ -1.38
Col18a1P39061 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col18a1P39061 Olfr1143-201ENSMUST00000090708 945 ntBASIC6.41□□□□□ -1.38
Col18a1P39061 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
Col18a1P39061 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col18a1P39061 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Col18a1P39061 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Col18a1P39061 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Col18a1P39061 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col18a1P39061 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
Col18a1P39061 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Col18a1P39061 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
Col18a1P39061 Gm37192-201ENSMUST00000194479 1348 ntBASIC6.4□□□□□ -1.38
Col18a1P39061 Gm22498-201ENSMUST00000104497 86 ntBASIC6.4□□□□□ -1.38
Col18a1P39061 Gm5943-201ENSMUST00000119458 459 ntBASIC6.4□□□□□ -1.38
Col18a1P39061 Gm12837-201ENSMUST00000120131 373 ntBASIC6.4□□□□□ -1.38
Col18a1P39061 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC6.4□□□□□ -1.38
Col18a1P39061 Gm22480-201ENSMUST00000122568 128 ntBASIC6.4□□□□□ -1.38
Col18a1P39061 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Col18a1P39061 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Col18a1P39061 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC6.4□□□□□ -1.38
Col18a1P39061 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC6.4□□□□□ -1.38
Col18a1P39061 Gm44485-201ENSMUST00000199569 137 ntBASIC6.4□□□□□ -1.38
Col18a1P39061 Gm2314-201ENSMUST00000200391 586 ntBASIC6.4□□□□□ -1.38
Col18a1P39061 Gm7039-201ENSMUST00000205138 346 ntBASIC6.4□□□□□ -1.38
Col18a1P39061 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC6.4□□□□□ -1.38
Col18a1P39061 Gm45658-201ENSMUST00000209197 580 ntBASIC6.4□□□□□ -1.38
Col18a1P39061 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC6.4□□□□□ -1.38
Col18a1P39061 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC6.4□□□□□ -1.38
Col18a1P39061 Gm17890-201ENSMUST00000221419 757 ntBASIC6.4□□□□□ -1.38
Col18a1P39061 AC122035.2-201ENSMUST00000228698 462 ntBASIC6.4□□□□□ -1.38
Col18a1P39061 CT025525.3-201ENSMUST00000228858 366 ntBASIC6.4□□□□□ -1.38
Col18a1P39061 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
Col18a1P39061 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
Col18a1P39061 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Col18a1P39061 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col18a1P39061 AC107645.1-201ENSMUST00000228660 1810 ntBASIC6.4□□□□□ -1.39
Col18a1P39061 Gm42704-201ENSMUST00000196875 1778 ntBASIC6.4□□□□□ -1.39
Col18a1P39061 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Col18a1P39061 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col18a1P39061 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col18a1P39061 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Col18a1P39061 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
Col18a1P39061 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col18a1P39061 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col18a1P39061 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col18a1P39061 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Col18a1P39061 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col18a1P39061 Mir669i-201ENSMUST00000117007 127 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Gm13172-201ENSMUST00000118685 256 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC6.39□□□□□ -1.39
Col18a1P39061 Gm22569-201ENSMUST00000175545 124 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC6.39□□□□□ -1.39
Col18a1P39061 Gm28418-201ENSMUST00000186179 423 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Gm29641-201ENSMUST00000188955 259 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Gm44409-201ENSMUST00000198810 166 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Gm42896-201ENSMUST00000201249 1113 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Gm17780-201ENSMUST00000207142 612 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Gm45628-201ENSMUST00000210849 274 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Gm9616-201ENSMUST00000221154 781 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Col18a1P39061 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
Col18a1P39061 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Col18a1P39061 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Col18a1P39061 Gm10042-201ENSMUST00000079884 78 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Col18a1P39061 Gm6065-201ENSMUST00000081336 492 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 n-R5s152-201ENSMUST00000093641 119 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Gm6043-201ENSMUST00000099961 492 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Gm37140-201ENSMUST00000192914 1684 ntBASIC6.39□□□□□ -1.39
Col18a1P39061 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col18a1P39061 Gm37011-201ENSMUST00000195543 2935 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms