Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CfdP03953 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC3.39□□□□□ -1.87
CfdP03953 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CfdP03953 Gm23441-201ENSMUST00000157268 127 ntBASIC3.39□□□□□ -1.87
CfdP03953 Gm22226-201ENSMUST00000157355 109 ntBASIC3.39□□□□□ -1.87
CfdP03953 Gm22314-201ENSMUST00000158007 281 ntBASIC3.39□□□□□ -1.87
CfdP03953 Gm23546-201ENSMUST00000158211 137 ntBASIC3.39□□□□□ -1.87
CfdP03953 Gm26354-201ENSMUST00000158221 129 ntBASIC3.39□□□□□ -1.87
CfdP03953 Gm3191-201ENSMUST00000167139 346 ntBASIC3.39□□□□□ -1.87
CfdP03953 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CfdP03953 Gm22254-201ENSMUST00000179186 110 ntBASIC3.39□□□□□ -1.87
CfdP03953 Gm27190-201ENSMUST00000184890 542 ntBASIC3.39□□□□□ -1.87
CfdP03953 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.39□□□□□ -1.87
CfdP03953 Gm18382-201ENSMUST00000194394 582 ntBASIC3.39□□□□□ -1.87
CfdP03953 Gm35702-201ENSMUST00000198653 511 ntBASIC3.39□□□□□ -1.87
CfdP03953 Gm43309-201ENSMUST00000200837 458 ntBASIC3.39□□□□□ -1.87
CfdP03953 Gm43974-201ENSMUST00000205080 684 ntBASIC3.39□□□□□ -1.87
CfdP03953 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CfdP03953 Gm18387-201ENSMUST00000220333 702 ntBASIC3.39□□□□□ -1.87
CfdP03953 Gm40692-201ENSMUST00000220411 491 ntBASIC3.39□□□□□ -1.87
CfdP03953 Gm46998-201ENSMUST00000221444 330 ntBASIC3.39□□□□□ -1.87
CfdP03953 AC160114.2-201ENSMUST00000223021 300 ntBASIC3.39□□□□□ -1.87
CfdP03953 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CfdP03953 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CfdP03953 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CfdP03953 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CfdP03953 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CfdP03953 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CfdP03953 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.39□□□□□ -1.87
CfdP03953 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CfdP03953 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CfdP03953 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CfdP03953 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CfdP03953 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC3.38□□□□□ -1.87
CfdP03953 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CfdP03953 AC126673.1-201ENSMUST00000223208 3856 ntBASIC3.38□□□□□ -1.87
CfdP03953 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CfdP03953 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CfdP03953 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CfdP03953 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CfdP03953 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC3.38□□□□□ -1.87
CfdP03953 Gm14788-201ENSMUST00000119457 375 ntBASIC3.38□□□□□ -1.87
CfdP03953 Gm11260-201ENSMUST00000121163 942 ntBASIC3.38□□□□□ -1.87
CfdP03953 Gm15780-201ENSMUST00000121283 935 ntBASIC3.38□□□□□ -1.87
CfdP03953 Gm14916-201ENSMUST00000121904 204 ntBASIC3.38□□□□□ -1.87
CfdP03953 Gm25843-201ENSMUST00000122582 314 ntBASIC3.38□□□□□ -1.87
CfdP03953 Gm10444-201ENSMUST00000126708 148 ntBASIC3.38□□□□□ -1.87
CfdP03953 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC3.38□□□□□ -1.87
CfdP03953 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC3.38□□□□□ -1.87
CfdP03953 Gm23327-201ENSMUST00000157420 78 ntBASIC3.38□□□□□ -1.87
CfdP03953 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC3.38□□□□□ -1.87
CfdP03953 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CfdP03953 Gm17981-201ENSMUST00000191109 739 ntBASIC3.38□□□□□ -1.87
CfdP03953 Gm28877-201ENSMUST00000191349 604 ntBASIC3.38□□□□□ -1.87
CfdP03953 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.38□□□□□ -1.87
CfdP03953 Gm38330-201ENSMUST00000192743 959 ntBASIC3.38□□□□□ -1.87
CfdP03953 Gm38332-201ENSMUST00000194189 147 ntBASIC3.38□□□□□ -1.87
CfdP03953 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CfdP03953 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC3.38□□□□□ -1.87
CfdP03953 Gm4734-201ENSMUST00000200117 777 ntBASIC3.38□□□□□ -1.87
CfdP03953 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.38□□□□□ -1.87
CfdP03953 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CfdP03953 AC132237.2-201ENSMUST00000221702 1209 ntBASIC3.38□□□□□ -1.87
CfdP03953 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CfdP03953 Mir31-201ENSMUST00000083474 106 ntBASIC3.38□□□□□ -1.87
CfdP03953 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.38□□□□□ -1.87
CfdP03953 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CfdP03953 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.38□□□□□ -1.87
CfdP03953 Gm13230-201ENSMUST00000120870 1575 ntBASIC3.38□□□□□ -1.87
CfdP03953 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
CfdP03953 Gm37789-201ENSMUST00000192862 2889 ntBASIC3.37□□□□□ -1.87
CfdP03953 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CfdP03953 Gm24318-201ENSMUST00000104490 131 ntBASIC3.37□□□□□ -1.87
CfdP03953 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC3.37□□□□□ -1.87
CfdP03953 Gm15073-201ENSMUST00000117432 634 ntBASIC3.37□□□□□ -1.87
CfdP03953 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.37□□□□□ -1.87
CfdP03953 Gm11718-201ENSMUST00000119942 537 ntBASIC3.37□□□□□ -1.87
CfdP03953 Gm14768-201ENSMUST00000122126 678 ntBASIC3.37□□□□□ -1.87
CfdP03953 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC3.37□□□□□ -1.87
CfdP03953 Gm5353-201ENSMUST00000139800 793 ntBASIC3.37□□□□□ -1.87
CfdP03953 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CfdP03953 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC3.37□□□□□ -1.87
CfdP03953 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.37□□□□□ -1.87
CfdP03953 Gm22870-201ENSMUST00000157501 112 ntBASIC3.37□□□□□ -1.87
CfdP03953 Gm23897-201ENSMUST00000158110 158 ntBASIC3.37□□□□□ -1.87
CfdP03953 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.37□□□□□ -1.87
CfdP03953 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC3.37□□□□□ -1.87
CfdP03953 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC3.37□□□□□ -1.87
CfdP03953 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CfdP03953 Gm27602-201ENSMUST00000183861 111 ntBASIC3.37□□□□□ -1.87
CfdP03953 Mir6374-201ENSMUST00000184003 107 ntBASIC3.37□□□□□ -1.87
CfdP03953 Gm27899-201ENSMUST00000184715 64 ntBASIC3.37□□□□□ -1.87
CfdP03953 Gm29320-201ENSMUST00000185235 615 ntBASIC3.37□□□□□ -1.87
CfdP03953 Gm28471-201ENSMUST00000185994 615 ntBASIC3.37□□□□□ -1.87
CfdP03953 Gm29179-202ENSMUST00000186138 615 ntBASIC3.37□□□□□ -1.87
CfdP03953 Gm28598-201ENSMUST00000186490 615 ntBASIC3.37□□□□□ -1.87
CfdP03953 Gm29448-201ENSMUST00000186675 615 ntBASIC3.37□□□□□ -1.87
CfdP03953 Gm29314-201ENSMUST00000186800 615 ntBASIC3.37□□□□□ -1.87
CfdP03953 Gm28253-202ENSMUST00000187971 615 ntBASIC3.37□□□□□ -1.87
CfdP03953 Gm29268-201ENSMUST00000188669 615 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms