Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm23737-201ENSMUST00000082547 159 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Olfr519-201ENSMUST00000084752 960 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Pcdh1F7BJK1 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm25563-201ENSMUST00000104603 74 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm14995-201ENSMUST00000117135 391 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm15660-201ENSMUST00000118997 478 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm12281-201ENSMUST00000119536 298 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm15387-201ENSMUST00000120421 648 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm11200-201ENSMUST00000121698 448 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm12293-201ENSMUST00000121898 590 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm13368-201ENSMUST00000122443 430 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm11197-201ENSMUST00000145158 839 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm25013-201ENSMUST00000158402 128 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm27781-201ENSMUST00000185185 92 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm28974-201ENSMUST00000187893 231 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm37164-201ENSMUST00000192809 637 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm6631-201ENSMUST00000193699 559 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm5842-201ENSMUST00000195073 622 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm43418-201ENSMUST00000201334 428 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm3442-201ENSMUST00000216808 710 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 AC161758.1-201ENSMUST00000226123 310 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 CT010453.2-201ENSMUST00000227005 483 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm8256-203ENSMUST00000228692 591 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm25859-201ENSMUST00000083710 91 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm5518-201ENSMUST00000084171 648 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm37903-201ENSMUST00000192122 2381 ntBASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Pcdh1F7BJK1 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms