Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
Cdh23Q99PF4 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cdh23Q99PF4 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Cdh23Q99PF4 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Cdh23Q99PF4 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Cdh23Q99PF4 Gm6274-201ENSMUST00000118173 797 ntBASIC3.94□□□□□ -1.78
Cdh23Q99PF4 Gm8757-201ENSMUST00000119660 372 ntBASIC3.94□□□□□ -1.78
Cdh23Q99PF4 Gm11398-201ENSMUST00000120330 320 ntBASIC3.94□□□□□ -1.78
Cdh23Q99PF4 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.94□□□□□ -1.78
Cdh23Q99PF4 Gm9931-201ENSMUST00000193584 1185 ntBASIC3.94□□□□□ -1.78
Cdh23Q99PF4 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC3.94□□□□□ -1.78
Cdh23Q99PF4 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.94□□□□□ -1.78
Cdh23Q99PF4 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Cdh23Q99PF4 Gm24817-201ENSMUST00000093672 105 ntBASIC3.94□□□□□ -1.78
Cdh23Q99PF4 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Cdh23Q99PF4 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cdh23Q99PF4 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cdh23Q99PF4 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC3.94□□□□□ -1.78
Cdh23Q99PF4 Gm9432-201ENSMUST00000117810 759 ntBASIC3.94□□□□□ -1.78
Cdh23Q99PF4 Gm22322-201ENSMUST00000157151 111 ntBASIC3.94□□□□□ -1.78
Cdh23Q99PF4 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC3.94□□□□□ -1.78
Cdh23Q99PF4 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.94□□□□□ -1.78
Cdh23Q99PF4 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cdh23Q99PF4 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cdh23Q99PF4 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Cdh23Q99PF4 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Gm26020-201ENSMUST00000122729 183 ntBASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Gm4134-201ENSMUST00000173244 563 ntBASIC3.93□□□□□ -1.78
Cdh23Q99PF4 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Gm18482-201ENSMUST00000202405 760 ntBASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Gm5649-201ENSMUST00000217918 951 ntBASIC3.93□□□□□ -1.78
Cdh23Q99PF4 AC113031.3-201ENSMUST00000226552 190 ntBASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Gm38091-201ENSMUST00000192418 3871 ntBASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Dbpht2-202ENSMUST00000221311 5341 ntBASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Gm23326-201ENSMUST00000157419 105 ntBASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.93□□□□□ -1.78
Cdh23Q99PF4 AC154634.3-201ENSMUST00000224589 736 ntBASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Hm629797-201ENSMUST00000183645 2398 ntBASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Gm11673-201ENSMUST00000117846 331 ntBASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Gm11233-201ENSMUST00000122357 634 ntBASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Gm26746-201ENSMUST00000181722 487 ntBASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Gm43036-201ENSMUST00000200594 373 ntBASIC3.93□□□□□ -1.78
Cdh23Q99PF4 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Nav1-202ENSMUST00000067414 13117 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Cdh23Q99PF4 AC164092.3-201ENSMUST00000216970 1323 ntBASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Gm44433-201ENSMUST00000203540 4832 ntBASIC3.92□□□□□ -1.78
Cdh23Q99PF4 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Gm24727-201ENSMUST00000158231 144 ntBASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Gm43774-201ENSMUST00000196327 878 ntBASIC3.92□□□□□ -1.78
Cdh23Q99PF4 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Gm44966-201ENSMUST00000208096 157 ntBASIC3.92□□□□□ -1.78
Cdh23Q99PF4 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Mir34b-201ENSMUST00000083558 84 ntBASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Gm16421-201ENSMUST00000117616 1557 ntBASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Gm38126-201ENSMUST00000195297 4003 ntBASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Gm16021-201ENSMUST00000121176 219 ntBASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC3.92□□□□□ -1.78
Cdh23Q99PF4 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms