Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Pcdhb3Q91XZ7 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdhb3Q91XZ7 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdhb3Q91XZ7 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdhb3Q91XZ7 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Pcdhb3Q91XZ7 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Gm24780-201ENSMUST00000157635 143 ntBASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Gm23078-201ENSMUST00000157848 148 ntBASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Gm26025-201ENSMUST00000158655 271 ntBASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Gm25989-201ENSMUST00000158761 133 ntBASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Gm43286-201ENSMUST00000197420 424 ntBASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Gm2860-201ENSMUST00000199226 707 ntBASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 AC158803.1-201ENSMUST00000219495 316 ntBASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Gm31711-201ENSMUST00000220687 196 ntBASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 AC192088.3-201ENSMUST00000227858 831 ntBASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Gm9985-201ENSMUST00000044101 510 ntBASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Gm5528-201ENSMUST00000076314 480 ntBASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Gm24457-201ENSMUST00000083196 105 ntBASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Gm22740-201ENSMUST00000083439 109 ntBASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdhb3Q91XZ7 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Gm35755-201ENSMUST00000222392 2077 ntBASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 AC123858.1-201ENSMUST00000226948 1874 ntBASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Gm25379-201ENSMUST00000104338 114 ntBASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 n-R5s172-201ENSMUST00000104508 114 ntBASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Gm8424-201ENSMUST00000117716 988 ntBASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Gm12231-201ENSMUST00000119447 695 ntBASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Gm12174-201ENSMUST00000119853 813 ntBASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Gm12042-201ENSMUST00000120479 301 ntBASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Mir8105-201ENSMUST00000184718 89 ntBASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Gm38098-201ENSMUST00000194115 241 ntBASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Ighv1-29-201ENSMUST00000194116 342 ntBASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Gm5711-201ENSMUST00000197896 421 ntBASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Gm8479-201ENSMUST00000203825 718 ntBASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Gm4585-201ENSMUST00000207218 452 ntBASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Gm6850-201ENSMUST00000210031 530 ntBASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Gm45313-201ENSMUST00000210584 178 ntBASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 CT025665.1-201ENSMUST00000215251 1199 ntBASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 AC154380.1-201ENSMUST00000226804 720 ntBASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdhb3Q91XZ7 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms