Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm27355-201ENSMUST00000185045 128 ntBASIC4.11□□□□□ -1.75
Lsm1Q8VC85 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Gm28596-201ENSMUST00000185870 696 ntBASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Gm29086-201ENSMUST00000186774 222 ntBASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Gm29085-201ENSMUST00000187108 225 ntBASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Gm32295-201ENSMUST00000192558 696 ntBASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Gm31260-201ENSMUST00000193478 696 ntBASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Gm17954-201ENSMUST00000195893 607 ntBASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Mir7682-201ENSMUST00000198467 58 ntBASIC4.11□□□□□ -1.75
Lsm1Q8VC85 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Gm7093-201ENSMUST00000223004 581 ntBASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Gm25800-201ENSMUST00000082636 134 ntBASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Lsm1Q8VC85 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.11□□□□□ -1.75
Lsm1Q8VC85 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Gm24608-201ENSMUST00000104381 136 ntBASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Gm15752-201ENSMUST00000117427 394 ntBASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Gm12520-201ENSMUST00000117493 316 ntBASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Gm14388-201ENSMUST00000118119 477 ntBASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Gm11366-201ENSMUST00000119279 429 ntBASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Gm11510-201ENSMUST00000120278 347 ntBASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Gm22312-201ENSMUST00000158005 130 ntBASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Gm22177-201ENSMUST00000175002 158 ntBASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Gm4412-201ENSMUST00000186660 433 ntBASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Gm21735-201ENSMUST00000190360 696 ntBASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Gm9722-201ENSMUST00000194568 802 ntBASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Gm4734-201ENSMUST00000200117 777 ntBASIC4.1□□□□□ -1.75
Lsm1Q8VC85 CR974592.1-201ENSMUST00000220422 574 ntBASIC4.1□□□□□ -1.75
Lsm1Q8VC85 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.1□□□□□ -1.75
Lsm1Q8VC85 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Lsm1Q8VC85 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.1□□□□□ -1.75
Lsm1Q8VC85 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.1□□□□□ -1.75
Lsm1Q8VC85 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Gm44624-201ENSMUST00000208700 2278 ntBASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Gm11633-201ENSMUST00000118176 444 ntBASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Gm13550-201ENSMUST00000118185 525 ntBASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Gm5060-201ENSMUST00000120072 599 ntBASIC4.09□□□□□ -1.75
Lsm1Q8VC85 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Zakit-201ENSMUST00000157677 308 ntBASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Gm22519-201ENSMUST00000158270 178 ntBASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Gm22156-201ENSMUST00000158409 141 ntBASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Gm17109-201ENSMUST00000163985 358 ntBASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Mir7020-201ENSMUST00000183787 70 ntBASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Gm27883-201ENSMUST00000183941 102 ntBASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Gm28976-201ENSMUST00000188070 144 ntBASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Mir1892-201ENSMUST00000197752 80 ntBASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Gm42526-201ENSMUST00000198956 393 ntBASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Gm43710-201ENSMUST00000199583 452 ntBASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Gm44946-201ENSMUST00000208425 572 ntBASIC4.09□□□□□ -1.75
Lsm1Q8VC85 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.09□□□□□ -1.75
Lsm1Q8VC85 AC173345.3-201ENSMUST00000221245 1093 ntBASIC4.09□□□□□ -1.75
Lsm1Q8VC85 AC099612.2-201ENSMUST00000226824 721 ntBASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Lsm1Q8VC85 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 106.2 ms