Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm12808-201ENSMUST00000120597 404 ntBASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Gm15038-201ENSMUST00000122144 296 ntBASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Gm12317-201ENSMUST00000122307 319 ntBASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Gm23205-201ENSMUST00000158671 103 ntBASIC5.29□□□□□ -1.56
Trim9Q8C7M3 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Gm16236-201ENSMUST00000159588 379 ntBASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Gm18417-201ENSMUST00000176564 648 ntBASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Gm23186-201ENSMUST00000180078 107 ntBASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Mir6344-201ENSMUST00000183462 104 ntBASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Gm29460-201ENSMUST00000188607 714 ntBASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Gm21803-201ENSMUST00000188897 693 ntBASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Gm18181-201ENSMUST00000190670 736 ntBASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Gm28211-201ENSMUST00000190920 315 ntBASIC5.29□□□□□ -1.56
Trim9Q8C7M3 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Gm37054-201ENSMUST00000193481 543 ntBASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Gm42502-201ENSMUST00000198550 1089 ntBASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Gm9057-201ENSMUST00000198791 296 ntBASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Gm18252-203ENSMUST00000215855 757 ntBASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Gm18388-201ENSMUST00000222339 557 ntBASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim9Q8C7M3 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim9Q8C7M3 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm8129-201ENSMUST00000118230 213 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm11708-201ENSMUST00000119530 832 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm14898-201ENSMUST00000120202 645 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm16412-201ENSMUST00000121602 273 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm12893-201ENSMUST00000121732 275 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm13007-201ENSMUST00000121866 365 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm25103-201ENSMUST00000122671 318 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm23546-201ENSMUST00000158211 137 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm10177-202ENSMUST00000161698 207 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm2855-201ENSMUST00000166765 456 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm4557-201ENSMUST00000185826 907 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm4526-201ENSMUST00000186039 920 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm8708-201ENSMUST00000188500 906 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm2979-201ENSMUST00000193442 463 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm22897-202ENSMUST00000197782 127 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm18127-201ENSMUST00000208479 725 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm5649-201ENSMUST00000217918 951 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 CT025548.1-201ENSMUST00000227459 257 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Mir129-2-201ENSMUST00000083577 90 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim9Q8C7M3 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim9Q8C7M3 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Trim9Q8C7M3 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Trim9Q8C7M3 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Trim9Q8C7M3 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Trim9Q8C7M3 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim9Q8C7M3 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim9Q8C7M3 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.27□□□□□ -1.57
Trim9Q8C7M3 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trim9Q8C7M3 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim9Q8C7M3 Gm23746-201ENSMUST00000104229 125 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms