Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Sh3rf1Q69ZI1 Gm20172-201ENSMUST00000193138 1551 ntBASIC5.84□□□□□ -1.48
Sh3rf1Q69ZI1 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Sh3rf1Q69ZI1 Gm5925-201ENSMUST00000105016 1497 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm37504-201ENSMUST00000192537 2374 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm8501-201ENSMUST00000117684 432 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm13998-201ENSMUST00000120952 335 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm14972-201ENSMUST00000121780 364 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm15075-201ENSMUST00000122187 477 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm24192-201ENSMUST00000157978 145 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm25445-201ENSMUST00000158996 299 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm24081-201ENSMUST00000175177 125 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm23631-201ENSMUST00000175291 123 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm20673-201ENSMUST00000177167 430 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm25451-201ENSMUST00000177832 121 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm29201-201ENSMUST00000189120 431 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm8419-201ENSMUST00000189886 412 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm37375-201ENSMUST00000193859 387 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm37385-201ENSMUST00000195223 387 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm43516-201ENSMUST00000196891 322 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm5983-201ENSMUST00000197739 770 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm43798-201ENSMUST00000202056 394 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm5990-201ENSMUST00000203126 746 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm19252-201ENSMUST00000204705 305 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm44768-201ENSMUST00000205719 393 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 AC163646.1-201ENSMUST00000227704 397 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 AC117588.2-201ENSMUST00000228340 311 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm24200-201ENSMUST00000082955 157 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm42639-201ENSMUST00000197061 1871 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Sh3rf1Q69ZI1 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Gm13220-201ENSMUST00000121535 508 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Gm12095-201ENSMUST00000121962 816 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Gm23792-201ENSMUST00000122557 93 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Gm23408-201ENSMUST00000158523 265 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Gm22116-201ENSMUST00000158791 141 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Gm22932-201ENSMUST00000175510 72 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Gm21959-201ENSMUST00000178439 452 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Gm26970-201ENSMUST00000182990 964 ntBASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Sh3rf1Q69ZI1 Gm35013-201ENSMUST00000197218 832 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms