Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm15981-201ENSMUST00000119196 457 ntBASIC6.1□□□□□ -1.43
Trim28Q62318 Gm11866-201ENSMUST00000120209 335 ntBASIC6.1□□□□□ -1.43
Trim28Q62318 Gm14500-201ENSMUST00000121647 113 ntBASIC6.1□□□□□ -1.43
Trim28Q62318 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC6.1□□□□□ -1.43
Trim28Q62318 Gm25605-201ENSMUST00000158364 124 ntBASIC6.1□□□□□ -1.43
Trim28Q62318 Gm2930-201ENSMUST00000170403 474 ntBASIC6.1□□□□□ -1.43
Trim28Q62318 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC6.1□□□□□ -1.43
Trim28Q62318 Gm27286-201ENSMUST00000184934 179 ntBASIC6.1□□□□□ -1.43
Trim28Q62318 Gm28614-201ENSMUST00000186483 458 ntBASIC6.1□□□□□ -1.43
Trim28Q62318 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim28Q62318 Gm19224-201ENSMUST00000190477 793 ntBASIC6.1□□□□□ -1.43
Trim28Q62318 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim28Q62318 Gm28211-201ENSMUST00000190920 315 ntBASIC6.1□□□□□ -1.43
Trim28Q62318 Gm18445-201ENSMUST00000195502 774 ntBASIC6.1□□□□□ -1.43
Trim28Q62318 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim28Q62318 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim28Q62318 Gm42976-201ENSMUST00000200313 222 ntBASIC6.1□□□□□ -1.43
Trim28Q62318 Gm9560-201ENSMUST00000205012 1201 ntBASIC6.1□□□□□ -1.43
Trim28Q62318 CT956049.1-201ENSMUST00000225671 763 ntBASIC6.1□□□□□ -1.43
Trim28Q62318 AC122393.1-201ENSMUST00000226570 319 ntBASIC6.1□□□□□ -1.43
Trim28Q62318 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim28Q62318 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC6.1□□□□□ -1.43
Trim28Q62318 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim28Q62318 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim28Q62318 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim28Q62318 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Trim28Q62318 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Trim28Q62318 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Trim28Q62318 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim28Q62318 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Trim28Q62318 Gm42494-201ENSMUST00000196515 3051 ntBASIC6.1□□□□□ -1.43
Trim28Q62318 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim28Q62318 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim28Q62318 Gm37562-201ENSMUST00000194763 4328 ntBASIC6.09□□□□□ -1.43
Trim28Q62318 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim28Q62318 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim28Q62318 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim28Q62318 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.43
Trim28Q62318 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim28Q62318 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Trim28Q62318 Gm24125-201ENSMUST00000104105 137 ntBASIC6.09□□□□□ -1.43
Trim28Q62318 Gm13532-201ENSMUST00000120373 240 ntBASIC6.09□□□□□ -1.43
Trim28Q62318 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Trim28Q62318 Gm21999-201ENSMUST00000165985 387 ntBASIC6.09□□□□□ -1.43
Trim28Q62318 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Trim28Q62318 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC6.09□□□□□ -1.43
Trim28Q62318 Gm20701-201ENSMUST00000176082 347 ntBASIC6.09□□□□□ -1.43
Trim28Q62318 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Trim28Q62318 Gm21850-201ENSMUST00000179792 359 ntBASIC6.09□□□□□ -1.43
Trim28Q62318 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC6.09□□□□□ -1.43
Trim28Q62318 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC6.09□□□□□ -1.43
Trim28Q62318 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim28Q62318 Mir5121-201ENSMUST00000198528 74 ntBASIC6.09□□□□□ -1.43
Trim28Q62318 Gm45209-201ENSMUST00000207122 353 ntBASIC6.09□□□□□ -1.43
Trim28Q62318 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC6.09□□□□□ -1.43
Trim28Q62318 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC6.09□□□□□ -1.43
Trim28Q62318 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC6.09□□□□□ -1.43
Trim28Q62318 AC132384.13-201ENSMUST00000219556 1159 ntBASIC6.09□□□□□ -1.43
Trim28Q62318 CT025552.2-201ENSMUST00000225497 317 ntBASIC6.09□□□□□ -1.43
Trim28Q62318 AC154738.2-201ENSMUST00000227403 1110 ntBASIC6.09□□□□□ -1.43
Trim28Q62318 AC144628.1-201ENSMUST00000227943 466 ntBASIC6.09□□□□□ -1.43
Trim28Q62318 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Trim28Q62318 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Trim28Q62318 Gm23099-201ENSMUST00000083454 139 ntBASIC6.09□□□□□ -1.43
Trim28Q62318 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Trim28Q62318 AC122317.3-201ENSMUST00000219320 3524 ntBASIC6.09□□□□□ -1.43
Trim28Q62318 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Trim28Q62318 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Trim28Q62318 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Trim28Q62318 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim28Q62318 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Trim28Q62318 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.08□□□□□ -1.44
Trim28Q62318 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trim28Q62318 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim28Q62318 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim28Q62318 Gm16394-201ENSMUST00000117289 675 ntBASIC6.08□□□□□ -1.44
Trim28Q62318 Gm14628-201ENSMUST00000117508 635 ntBASIC6.08□□□□□ -1.44
Trim28Q62318 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC6.08□□□□□ -1.44
Trim28Q62318 Gm15012-201ENSMUST00000119176 106 ntBASIC6.08□□□□□ -1.44
Trim28Q62318 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC6.08□□□□□ -1.44
Trim28Q62318 Gm23387-201ENSMUST00000158586 107 ntBASIC6.08□□□□□ -1.44
Trim28Q62318 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC6.08□□□□□ -1.44
Trim28Q62318 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Trim28Q62318 Gm37670-201ENSMUST00000193622 229 ntBASIC6.08□□□□□ -1.44
Trim28Q62318 Gm17935-201ENSMUST00000196649 772 ntBASIC6.08□□□□□ -1.44
Trim28Q62318 Igkv12-49-201ENSMUST00000197714 278 ntBASIC6.08□□□□□ -1.44
Trim28Q62318 Gm44485-201ENSMUST00000199569 137 ntBASIC6.08□□□□□ -1.44
Trim28Q62318 Gm44003-201ENSMUST00000203024 490 ntBASIC6.08□□□□□ -1.44
Trim28Q62318 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC6.08□□□□□ -1.44
Trim28Q62318 Gm44118-201ENSMUST00000204665 229 ntBASIC6.08□□□□□ -1.44
Trim28Q62318 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC6.08□□□□□ -1.44
Trim28Q62318 Gm36371-201ENSMUST00000209043 1103 ntBASIC6.08□□□□□ -1.44
Trim28Q62318 Gm20948-201ENSMUST00000211091 449 ntBASIC6.08□□□□□ -1.44
Trim28Q62318 CT573422.1-201ENSMUST00000216655 405 ntBASIC6.08□□□□□ -1.44
Trim28Q62318 AC132112.1-201ENSMUST00000226354 505 ntBASIC6.08□□□□□ -1.44
Trim28Q62318 AC129208.2-201ENSMUST00000228506 320 ntBASIC6.08□□□□□ -1.44
Trim28Q62318 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim28Q62318 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Trim28Q62318 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
Trim28Q62318 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms