Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm16463-201ENSMUST00000120527 721 ntBASIC7.15□□□□□ -1.27
Col17a1Q07563 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Col17a1Q07563 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC7.15□□□□□ -1.27
Col17a1Q07563 Mir1251-201ENSMUST00000175486 84 ntBASIC7.15□□□□□ -1.27
Col17a1Q07563 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Col17a1Q07563 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Col17a1Q07563 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC7.15□□□□□ -1.27
Col17a1Q07563 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC7.15□□□□□ -1.27
Col17a1Q07563 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC7.15□□□□□ -1.27
Col17a1Q07563 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC7.15□□□□□ -1.27
Col17a1Q07563 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC7.15□□□□□ -1.27
Col17a1Q07563 AL935138.1-201ENSMUST00000215309 196 ntBASIC7.15□□□□□ -1.27
Col17a1Q07563 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Col17a1Q07563 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC7.15□□□□□ -1.27
Col17a1Q07563 CT025536.1-201ENSMUST00000226744 844 ntBASIC7.15□□□□□ -1.27
Col17a1Q07563 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Col17a1Q07563 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC7.15□□□□□ -1.27
Col17a1Q07563 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Col17a1Q07563 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Col17a1Q07563 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Col17a1Q07563 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.27
Col17a1Q07563 n-R5s152-201ENSMUST00000093641 119 ntBASIC7.15□□□□□ -1.27
Col17a1Q07563 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Col17a1Q07563 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Col17a1Q07563 Gm37412-201ENSMUST00000194866 4321 ntBASIC7.15□□□□□ -1.27
Col17a1Q07563 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
Col17a1Q07563 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.27
Col17a1Q07563 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Col17a1Q07563 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col17a1Q07563 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col17a1Q07563 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col17a1Q07563 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col17a1Q07563 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col17a1Q07563 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
Col17a1Q07563 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col17a1Q07563 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col17a1Q07563 Gm12819-201ENSMUST00000122223 629 ntBASIC7.14□□□□□ -1.27
Col17a1Q07563 Gm15274-201ENSMUST00000131442 291 ntBASIC7.14□□□□□ -1.27
Col17a1Q07563 Gm21979-201ENSMUST00000139887 291 ntBASIC7.14□□□□□ -1.27
Col17a1Q07563 Gm15259-201ENSMUST00000151262 291 ntBASIC7.14□□□□□ -1.27
Col17a1Q07563 Gm24477-201ENSMUST00000157438 103 ntBASIC7.14□□□□□ -1.27
Col17a1Q07563 Mir5106-201ENSMUST00000174936 73 ntBASIC7.14□□□□□ -1.27
Col17a1Q07563 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC7.14□□□□□ -1.27
Col17a1Q07563 Gm18645-201ENSMUST00000209593 651 ntBASIC7.14□□□□□ -1.27
Col17a1Q07563 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col17a1Q07563 AC159622.1-201ENSMUST00000221004 554 ntBASIC7.14□□□□□ -1.27
Col17a1Q07563 AC154738.1-201ENSMUST00000227054 368 ntBASIC7.14□□□□□ -1.27
Col17a1Q07563 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Col17a1Q07563 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Col17a1Q07563 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Col17a1Q07563 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col17a1Q07563 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Col17a1Q07563 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col17a1Q07563 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col17a1Q07563 Gm37195-201ENSMUST00000192006 3018 ntBASIC7.13□□□□□ -1.27
Col17a1Q07563 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col17a1Q07563 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col17a1Q07563 Gm42870-201ENSMUST00000199355 3470 ntBASIC7.13□□□□□ -1.27
Col17a1Q07563 Gm38190-201ENSMUST00000192350 4755 ntBASIC7.13□□□□□ -1.27
Col17a1Q07563 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col17a1Q07563 Gm23709-201ENSMUST00000104364 130 ntBASIC7.13□□□□□ -1.27
Col17a1Q07563 Mir669d-2-201ENSMUST00000116854 86 ntBASIC7.13□□□□□ -1.27
Col17a1Q07563 Gm14981-201ENSMUST00000117325 943 ntBASIC7.13□□□□□ -1.27
Col17a1Q07563 Gm14576-201ENSMUST00000118073 1111 ntBASIC7.13□□□□□ -1.27
Col17a1Q07563 Gm11409-201ENSMUST00000118621 403 ntBASIC7.13□□□□□ -1.27
Col17a1Q07563 Gm14875-201ENSMUST00000120881 319 ntBASIC7.13□□□□□ -1.27
Col17a1Q07563 Gm13676-201ENSMUST00000122185 591 ntBASIC7.13□□□□□ -1.27
Col17a1Q07563 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col17a1Q07563 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col17a1Q07563 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC7.13□□□□□ -1.27
Col17a1Q07563 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC7.13□□□□□ -1.27
Col17a1Q07563 Gm27036-201ENSMUST00000182465 980 ntBASIC7.13□□□□□ -1.27
Col17a1Q07563 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC7.13□□□□□ -1.27
Col17a1Q07563 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Col17a1Q07563 Gm43941-201ENSMUST00000203303 1073 ntBASIC7.13□□□□□ -1.27
Col17a1Q07563 AC125484.1-201ENSMUST00000223218 234 ntBASIC7.13□□□□□ -1.27
Col17a1Q07563 AL590614.1-201ENSMUST00000226037 268 ntBASIC7.13□□□□□ -1.27
Col17a1Q07563 AC139845.2-201ENSMUST00000227504 436 ntBASIC7.13□□□□□ -1.27
Col17a1Q07563 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Col17a1Q07563 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Col17a1Q07563 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Col17a1Q07563 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Col17a1Q07563 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col17a1Q07563 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Col17a1Q07563 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col17a1Q07563 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col17a1Q07563 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col17a1Q07563 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col17a1Q07563 Gm45183-201ENSMUST00000207937 1497 ntBASIC7.13□□□□□ -1.27
Col17a1Q07563 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col17a1Q07563 AC124426.1-203ENSMUST00000221814 1362 ntBASIC7.13□□□□□ -1.27
Col17a1Q07563 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col17a1Q07563 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col17a1Q07563 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col17a1Q07563 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Col17a1Q07563 Gm22668-201ENSMUST00000158716 260 ntBASIC7.12□□□□□ -1.27
Col17a1Q07563 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC7.12□□□□□ -1.27
Col17a1Q07563 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col17a1Q07563 Gm7497-201ENSMUST00000183064 1003 ntBASIC7.12□□□□□ -1.27
Col17a1Q07563 Gm38214-201ENSMUST00000192581 988 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 108.5 ms