Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Nkx3-1P97436 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Nkx3-1P97436 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Nkx3-1P97436 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC3.68□□□□□ -1.82
Nkx3-1P97436 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Nkx3-1P97436 Gm37268-201ENSMUST00000192254 2614 ntBASIC3.68□□□□□ -1.82
Nkx3-1P97436 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Nkx3-1P97436 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Nkx3-1P97436 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Nkx3-1P97436 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm43178-201ENSMUST00000197257 1386 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm9597-202ENSMUST00000227632 1387 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm7988-201ENSMUST00000196623 2297 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm13567-201ENSMUST00000118026 247 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm12571-201ENSMUST00000118132 243 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm11877-201ENSMUST00000118921 852 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm11255-201ENSMUST00000120448 1180 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm5379-201ENSMUST00000120973 826 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm12978-201ENSMUST00000121250 522 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm12087-201ENSMUST00000121878 258 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm15534-201ENSMUST00000137642 562 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm23215-201ENSMUST00000178153 121 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm28830-201ENSMUST00000188192 213 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm45539-201ENSMUST00000210313 428 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 CT030194.1-201ENSMUST00000225507 532 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 AC117202.1-201ENSMUST00000227007 445 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 AC102603.1-201ENSMUST00000227481 584 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm8724-201ENSMUST00000081668 483 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm37588-201ENSMUST00000195024 2496 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.67□□□□□ -1.82
Nkx3-1P97436 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC3.67□□□□□ -1.82
Nkx3-1P97436 Gm38057-201ENSMUST00000195551 3203 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm28362-201ENSMUST00000189430 2420 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
Nkx3-1P97436 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Nkx3-1P97436 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm25169-201ENSMUST00000104190 129 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm23319-201ENSMUST00000104467 131 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Nkx3-1P97436 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm15916-201ENSMUST00000118355 736 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm14930-201ENSMUST00000118864 652 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm15361-201ENSMUST00000119320 444 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm12252-201ENSMUST00000119517 219 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm15038-201ENSMUST00000122144 296 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Nkx3-1P97436 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm4487-201ENSMUST00000150617 442 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm25447-201ENSMUST00000158997 128 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm8296-201ENSMUST00000185597 524 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm43853-201ENSMUST00000197162 301 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC3.66□□□□□ -1.82
Nkx3-1P97436 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm43892-201ENSMUST00000204373 265 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 Gm34272-201ENSMUST00000208886 253 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC3.66□□□□□ -1.82
Nkx3-1P97436 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Nkx3-1P97436 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.66□□□□□ -1.82
Nkx3-1P97436 AL606513.1-201ENSMUST00000225369 579 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms