Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Tpm1P58771 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Tpm1P58771 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Tpm1P58771 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Tpm1P58771 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Tpm1P58771 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4.58□□□□□ -1.68
Tpm1P58771 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Tpm1P58771 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Tpm1P58771 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Tpm1P58771 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
Tpm1P58771 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Tpm1P58771 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Tpm1P58771 Gm15752-201ENSMUST00000117427 394 ntBASIC4.57□□□□□ -1.68
Tpm1P58771 Gm14925-201ENSMUST00000120611 438 ntBASIC4.57□□□□□ -1.68
Tpm1P58771 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Tpm1P58771 Gm28061-201ENSMUST00000189085 807 ntBASIC4.57□□□□□ -1.68
Tpm1P58771 Gm18325-201ENSMUST00000203228 835 ntBASIC4.57□□□□□ -1.68
Tpm1P58771 Gm44371-201ENSMUST00000204148 467 ntBASIC4.57□□□□□ -1.68
Tpm1P58771 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Tpm1P58771 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC4.57□□□□□ -1.68
Tpm1P58771 Gm5457-201ENSMUST00000022260 333 ntBASIC4.57□□□□□ -1.68
Tpm1P58771 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.57□□□□□ -1.68
Tpm1P58771 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Tpm1P58771 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.57□□□□□ -1.68
Tpm1P58771 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.57□□□□□ -1.68
Tpm1P58771 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Tpm1P58771 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Tpm1P58771 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Tpm1P58771 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.57□□□□□ -1.68
Tpm1P58771 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Tpm1P58771 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.56□□□□□ -1.68
Tpm1P58771 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Tpm1P58771 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Tpm1P58771 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Tpm1P58771 Gm43662-201ENSMUST00000198310 2271 ntBASIC4.56□□□□□ -1.68
Tpm1P58771 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Tpm1P58771 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Tpm1P58771 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Tpm1P58771 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.56□□□□□ -1.68
Tpm1P58771 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Tpm1P58771 Gm22899-201ENSMUST00000104540 131 ntBASIC4.56□□□□□ -1.68
Tpm1P58771 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Tpm1P58771 Gm11878-201ENSMUST00000117908 400 ntBASIC4.56□□□□□ -1.68
Tpm1P58771 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.56□□□□□ -1.68
Tpm1P58771 Gm13333-201ENSMUST00000119424 781 ntBASIC4.56□□□□□ -1.68
Tpm1P58771 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Tpm1P58771 Gm9027-201ENSMUST00000165914 661 ntBASIC4.56□□□□□ -1.68
Tpm1P58771 Gm22177-201ENSMUST00000175002 158 ntBASIC4.56□□□□□ -1.68
Tpm1P58771 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC4.56□□□□□ -1.68
Tpm1P58771 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Tpm1P58771 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Tpm1P58771 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Tpm1P58771 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.56□□□□□ -1.68
Tpm1P58771 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.56□□□□□ -1.68
Tpm1P58771 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Tpm1P58771 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.56□□□□□ -1.68
Tpm1P58771 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.56□□□□□ -1.68
Tpm1P58771 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.56□□□□□ -1.68
Tpm1P58771 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.56□□□□□ -1.68
Tpm1P58771 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Tpm1P58771 Mir30b-201ENSMUST00000083542 96 ntBASIC4.56□□□□□ -1.68
Tpm1P58771 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Tpm1P58771 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Tpm1P58771 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Tpm1P58771 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.56□□□□□ -1.68
Tpm1P58771 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Tpm1P58771 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.56□□□□□ -1.68
Tpm1P58771 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Tpm1P58771 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Tpm1P58771 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Tpm1P58771 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.56□□□□□ -1.68
Tpm1P58771 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.56□□□□□ -1.68
Tpm1P58771 Gm3665-201ENSMUST00000177214 2461 ntBASIC4.55□□□□□ -1.68
Tpm1P58771 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC4.55□□□□□ -1.68
Tpm1P58771 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
Tpm1P58771 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Tpm1P58771 Gm44624-201ENSMUST00000208700 2278 ntBASIC4.55□□□□□ -1.68
Tpm1P58771 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Tpm1P58771 Gm15916-201ENSMUST00000118355 736 ntBASIC4.55□□□□□ -1.68
Tpm1P58771 Gm15225-201ENSMUST00000120449 1017 ntBASIC4.55□□□□□ -1.68
Tpm1P58771 Gm16327-201ENSMUST00000137146 228 ntBASIC4.55□□□□□ -1.68
Tpm1P58771 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.55□□□□□ -1.68
Tpm1P58771 Gm26187-201ENSMUST00000157693 101 ntBASIC4.55□□□□□ -1.68
Tpm1P58771 Gm25906-201ENSMUST00000158489 126 ntBASIC4.55□□□□□ -1.68
Tpm1P58771 Gm26460-201ENSMUST00000175061 126 ntBASIC4.55□□□□□ -1.68
Tpm1P58771 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Tpm1P58771 Gm27899-201ENSMUST00000184715 64 ntBASIC4.55□□□□□ -1.68
Tpm1P58771 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.55□□□□□ -1.68
Tpm1P58771 Gm3496-201ENSMUST00000188283 745 ntBASIC4.55□□□□□ -1.68
Tpm1P58771 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.55□□□□□ -1.68
Tpm1P58771 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC4.55□□□□□ -1.68
Tpm1P58771 Gm36259-201ENSMUST00000197340 392 ntBASIC4.55□□□□□ -1.68
Tpm1P58771 Igkv12-66-201ENSMUST00000199305 348 ntBASIC4.55□□□□□ -1.68
Tpm1P58771 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.55□□□□□ -1.68
Tpm1P58771 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC4.55□□□□□ -1.68
Tpm1P58771 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Tpm1P58771 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.55□□□□□ -1.68
Tpm1P58771 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Tpm1P58771 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.55□□□□□ -1.68
Tpm1P58771 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms