Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox1P53783 Gm12057-201ENSMUST00000117244 1427 ntBASIC5.94□□□□□ -1.46
Sox1P53783 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Sox1P53783 Gm25563-201ENSMUST00000104603 74 ntBASIC5.94□□□□□ -1.46
Sox1P53783 Gm15231-201ENSMUST00000119174 447 ntBASIC5.94□□□□□ -1.46
Sox1P53783 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC5.94□□□□□ -1.46
Sox1P53783 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.94□□□□□ -1.46
Sox1P53783 Gm23068-201ENSMUST00000158239 293 ntBASIC5.94□□□□□ -1.46
Sox1P53783 Gm24767-201ENSMUST00000158509 95 ntBASIC5.94□□□□□ -1.46
Sox1P53783 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC5.94□□□□□ -1.46
Sox1P53783 Gm29524-201ENSMUST00000190819 699 ntBASIC5.94□□□□□ -1.46
Sox1P53783 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC5.94□□□□□ -1.46
Sox1P53783 Gm38046-201ENSMUST00000192733 550 ntBASIC5.94□□□□□ -1.46
Sox1P53783 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Sox1P53783 Gm20056-201ENSMUST00000194813 519 ntBASIC5.94□□□□□ -1.46
Sox1P53783 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.94□□□□□ -1.46
Sox1P53783 Gm43669-201ENSMUST00000198229 436 ntBASIC5.94□□□□□ -1.46
Sox1P53783 Gm19147-201ENSMUST00000199622 652 ntBASIC5.94□□□□□ -1.46
Sox1P53783 Gm5735-201ENSMUST00000207053 167 ntBASIC5.94□□□□□ -1.46
Sox1P53783 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC5.94□□□□□ -1.46
Sox1P53783 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.94□□□□□ -1.46
Sox1P53783 AC147240.1-201ENSMUST00000218767 431 ntBASIC5.94□□□□□ -1.46
Sox1P53783 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.94□□□□□ -1.46
Sox1P53783 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.94□□□□□ -1.46
Sox1P53783 Gm22807-201ENSMUST00000082737 129 ntBASIC5.94□□□□□ -1.46
Sox1P53783 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.94□□□□□ -1.46
Sox1P53783 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Sox1P53783 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
Sox1P53783 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox1P53783 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC5.94□□□□□ -1.46
Sox1P53783 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.94□□□□□ -1.46
Sox1P53783 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Sox1P53783 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Sox1P53783 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox1P53783 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox1P53783 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Sox1P53783 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sox1P53783 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.94□□□□□ -1.46
Sox1P53783 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Sox1P53783 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox1P53783 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox1P53783 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sox1P53783 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Sox1P53783 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sox1P53783 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Sox1P53783 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox1P53783 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Sox1P53783 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sox1P53783 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox1P53783 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC5.93□□□□□ -1.46
Sox1P53783 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sox1P53783 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Sox1P53783 Gm42994-201ENSMUST00000195964 2549 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox1P53783 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox1P53783 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Sox1P53783 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.93□□□□□ -1.46
Sox1P53783 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox1P53783 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox1P53783 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Gm43496-201ENSMUST00000201682 3001 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Sox1P53783 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox1P53783 Gm14292-201ENSMUST00000118761 456 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Gm15660-201ENSMUST00000118997 478 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Gm15034-201ENSMUST00000120043 349 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Gm14852-201ENSMUST00000120065 647 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Gm16254-201ENSMUST00000131528 730 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC5.93□□□□□ -1.46
Sox1P53783 Gm24534-201ENSMUST00000157949 291 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Gm25670-201ENSMUST00000178423 107 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Gm26239-201ENSMUST00000178842 107 ntBASIC5.93□□□□□ -1.46
Sox1P53783 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sox1P53783 Gm24267-201ENSMUST00000179841 107 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC5.93□□□□□ -1.46
Sox1P53783 Gm21070-201ENSMUST00000182425 985 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Mir6238-201ENSMUST00000184140 129 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Gm28974-201ENSMUST00000187893 231 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Gm37313-201ENSMUST00000191673 290 ntBASIC5.93□□□□□ -1.46
Sox1P53783 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Gm37658-201ENSMUST00000192672 315 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Gm33973-201ENSMUST00000195148 534 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC5.93□□□□□ -1.46
Sox1P53783 Gm43441-201ENSMUST00000201458 205 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Gm44219-201ENSMUST00000203005 273 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Gm43976-201ENSMUST00000203637 235 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Gm44687-201ENSMUST00000204975 235 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Gm45081-201ENSMUST00000206281 572 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.93□□□□□ -1.46
Sox1P53783 AC116589.7-201ENSMUST00000221061 239 ntBASIC5.93□□□□□ -1.46
Sox1P53783 AC164117.1-201ENSMUST00000221726 239 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Sox1P53783 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox1P53783 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Sox1P53783 Gm23404-201ENSMUST00000082543 97 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Gm24292-201ENSMUST00000082888 107 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Gm23238-201ENSMUST00000083007 164 ntBASIC5.93□□□□□ -1.46
Sox1P53783 Gm24405-201ENSMUST00000083033 167 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms