Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Gm22609-201ENSMUST00000158286 121 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm25903-201ENSMUST00000158492 103 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm2564-201ENSMUST00000166898 707 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm26197-201ENSMUST00000175033 115 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm25306-201ENSMUST00000175288 117 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Mir3072-201ENSMUST00000175610 83 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm25190-201ENSMUST00000176664 95 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Mir6356-201ENSMUST00000183541 102 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Mir6415-201ENSMUST00000184064 100 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm27189-201ENSMUST00000184119 190 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Mir8100-201ENSMUST00000184230 121 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm27611-201ENSMUST00000184690 108 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm38305-201ENSMUST00000194825 223 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm42977-201ENSMUST00000197497 144 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm2602-201ENSMUST00000202112 571 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm43293-201ENSMUST00000202780 385 ntTSL 3 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm44219-201ENSMUST00000203005 273 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm44539-201ENSMUST00000206010 238 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm45185-201ENSMUST00000207556 404 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 AC160114.2-201ENSMUST00000223021 300 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 CT010486.1-201ENSMUST00000224609 422 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Mir301-201ENSMUST00000083655 86 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Ripor2-203ENSMUST00000091694 3142 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 AC125223.2-202ENSMUST00000225020 4103 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm21939-201ENSMUST00000221137 2773 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm13961-201ENSMUST00000119282 4772 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm32335-201ENSMUST00000216896 2948 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Tbc1d14-203ENSMUST00000126077 4085 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Gm37653-201ENSMUST00000195401 3578 ntBASIC1.2□□□□□ -2.22
Gm4559A4IF42 Eif4enif1-201ENSMUST00000020734 3565 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Mbtd1-206ENSMUST00000107854 5232 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Cd22-213ENSMUST00000190617 3230 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Slc28a1-202ENSMUST00000119083 2899 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Atxn7l1-210ENSMUST00000144586 3042 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Gm4559A4IF42 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 116.2 ms