Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.23□□□□□ -1.73
H2afb2S4R1M3 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Gm23226-201ENSMUST00000116927 103 ntBASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Gm14750-201ENSMUST00000118262 516 ntBASIC4.23□□□□□ -1.73
H2afb2S4R1M3 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Gm15212-201ENSMUST00000122403 466 ntBASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
H2afb2S4R1M3 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.23□□□□□ -1.73
H2afb2S4R1M3 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Gm22378-201ENSMUST00000157481 111 ntBASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Gm17063-201ENSMUST00000168135 456 ntBASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Gm27899-201ENSMUST00000184715 64 ntBASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Gm29228-201ENSMUST00000185489 418 ntBASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Gm28385-201ENSMUST00000185671 292 ntBASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Gm43765-201ENSMUST00000196303 893 ntBASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Gm17937-201ENSMUST00000197908 742 ntBASIC4.23□□□□□ -1.73
H2afb2S4R1M3 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Gm44259-201ENSMUST00000204996 298 ntBASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Gm44585-201ENSMUST00000207150 607 ntBASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC4.23□□□□□ -1.73
H2afb2S4R1M3 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Gm46327-201ENSMUST00000218240 365 ntBASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Gm17872-201ENSMUST00000222550 532 ntBASIC4.23□□□□□ -1.73
H2afb2S4R1M3 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC4.23□□□□□ -1.73
H2afb2S4R1M3 AL645546.2-201ENSMUST00000224526 265 ntBASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
H2afb2S4R1M3 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.23□□□□□ -1.73
H2afb2S4R1M3 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
H2afb2S4R1M3 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 AC122357.2-201ENSMUST00000220732 1525 ntBASIC4.22□□□□□ -1.73
H2afb2S4R1M3 AC168056.3-201ENSMUST00000225395 2540 ntBASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Gm13733-201ENSMUST00000117290 535 ntBASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Gm11698-201ENSMUST00000117948 455 ntBASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Gm5379-201ENSMUST00000120973 826 ntBASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Gm22514-201ENSMUST00000122547 308 ntBASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Gm15534-201ENSMUST00000137642 562 ntBASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Gm3053-201ENSMUST00000161709 616 ntBASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Gm3191-201ENSMUST00000167139 346 ntBASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Gm28011-201ENSMUST00000184097 175 ntBASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Gm29610-201ENSMUST00000187749 453 ntBASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Gm43974-201ENSMUST00000205080 684 ntBASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Gm46138-201ENSMUST00000215294 426 ntBASIC4.22□□□□□ -1.73
H2afb2S4R1M3 CT030124.1-201ENSMUST00000217130 235 ntBASIC4.22□□□□□ -1.73
H2afb2S4R1M3 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 AC156803.1-201ENSMUST00000224407 820 ntBASIC4.22□□□□□ -1.73
H2afb2S4R1M3 AC131117.2-203ENSMUST00000225886 950 ntBASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.22□□□□□ -1.73
H2afb2S4R1M3 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.22□□□□□ -1.73
H2afb2S4R1M3 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
H2afb2S4R1M3 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
H2afb2S4R1M3 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
H2afb2S4R1M3 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
H2afb2S4R1M3 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
H2afb2S4R1M3 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
H2afb2S4R1M3 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
H2afb2S4R1M3 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
H2afb2S4R1M3 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.21□□□□□ -1.74
H2afb2S4R1M3 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms