Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm20074-201ENSMUST00000208144 484 ntBASIC4.14□□□□□ -1.75
Upk3aQ9JKX8 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.14□□□□□ -1.75
Upk3aQ9JKX8 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.14□□□□□ -1.75
Upk3aQ9JKX8 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.14□□□□□ -1.75
Upk3aQ9JKX8 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Upk3aQ9JKX8 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.14□□□□□ -1.75
Upk3aQ9JKX8 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Upk3aQ9JKX8 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Upk3aQ9JKX8 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Upk3aQ9JKX8 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.14□□□□□ -1.75
Upk3aQ9JKX8 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Upk3aQ9JKX8 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.14□□□□□ -1.75
Upk3aQ9JKX8 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Upk3aQ9JKX8 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Upk3aQ9JKX8 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Upk3aQ9JKX8 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Upk3aQ9JKX8 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Upk3aQ9JKX8 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Gm24788-201ENSMUST00000104283 156 ntBASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Gm14126-201ENSMUST00000122345 395 ntBASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Gm3030-201ENSMUST00000163410 516 ntBASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Gm3339-201ENSMUST00000163462 475 ntBASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Mir6963-201ENSMUST00000183535 71 ntBASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Gm27899-201ENSMUST00000184715 64 ntBASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Gm8823-201ENSMUST00000193158 433 ntBASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Gm44972-201ENSMUST00000206419 406 ntBASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Gm7093-201ENSMUST00000223004 581 ntBASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 AC156559.1-201ENSMUST00000224158 222 ntBASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.13□□□□□ -1.75
Upk3aQ9JKX8 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Gm23226-201ENSMUST00000116927 103 ntBASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Gm14107-201ENSMUST00000117774 330 ntBASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Gm4852-201ENSMUST00000121202 729 ntBASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Gm25150-201ENSMUST00000157121 60 ntBASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Gm27976-201ENSMUST00000183635 162 ntBASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Mir6537-201ENSMUST00000184150 110 ntBASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Gm20203-201ENSMUST00000192352 332 ntBASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Gm37088-201ENSMUST00000193887 406 ntBASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Gm42666-201ENSMUST00000201954 152 ntBASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Gm44032-201ENSMUST00000204841 166 ntBASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Gm36371-201ENSMUST00000209043 1103 ntBASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Gm8556-201ENSMUST00000210437 664 ntBASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 AC156803.1-201ENSMUST00000224407 820 ntBASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
Upk3aQ9JKX8 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Upk3aQ9JKX8 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.11□□□□□ -1.75
Upk3aQ9JKX8 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Upk3aQ9JKX8 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms