Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trim56Q80VI1 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim56Q80VI1 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim56Q80VI1 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm22810-201ENSMUST00000082741 158 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trim56Q80VI1 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Trim56Q80VI1 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Trim56Q80VI1 Gm18852-201ENSMUST00000184149 3593 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim56Q80VI1 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim56Q80VI1 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Trim56Q80VI1 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Trim56Q80VI1 AC162908.1-201ENSMUST00000219164 4563 ntBASIC6.37□□□□□ -1.39
Trim56Q80VI1 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Trim56Q80VI1 AC163660.3-201ENSMUST00000224253 1563 ntBASIC6.36□□□□□ -1.39
Trim56Q80VI1 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim56Q80VI1 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim56Q80VI1 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trim56Q80VI1 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trim56Q80VI1 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trim56Q80VI1 Gm43313-201ENSMUST00000201398 2235 ntBASIC6.36□□□□□ -1.39
Trim56Q80VI1 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.36□□□□□ -1.39
Trim56Q80VI1 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
Trim56Q80VI1 Gm12370-201ENSMUST00000117809 604 ntBASIC6.36□□□□□ -1.39
Trim56Q80VI1 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC6.36□□□□□ -1.39
Trim56Q80VI1 Gm14785-201ENSMUST00000120185 539 ntBASIC6.36□□□□□ -1.39
Trim56Q80VI1 n-R5s201-201ENSMUST00000122622 116 ntBASIC6.36□□□□□ -1.39
Trim56Q80VI1 Gm26402-201ENSMUST00000158499 113 ntBASIC6.36□□□□□ -1.39
Trim56Q80VI1 Gm22646-201ENSMUST00000175130 115 ntBASIC6.36□□□□□ -1.39
Trim56Q80VI1 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC6.36□□□□□ -1.39
Trim56Q80VI1 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Trim56Q80VI1 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim56Q80VI1 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
Trim56Q80VI1 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC6.36□□□□□ -1.39
Trim56Q80VI1 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC6.36□□□□□ -1.39
Trim56Q80VI1 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim56Q80VI1 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim56Q80VI1 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC6.36□□□□□ -1.39
Trim56Q80VI1 Gm44134-202ENSMUST00000204777 545 ntBASIC6.36□□□□□ -1.39
Trim56Q80VI1 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim56Q80VI1 Gm45215-201ENSMUST00000206407 395 ntBASIC6.36□□□□□ -1.39
Trim56Q80VI1 Gm44654-201ENSMUST00000208052 329 ntBASIC6.36□□□□□ -1.39
Trim56Q80VI1 Gm7624-201ENSMUST00000209702 435 ntBASIC6.36□□□□□ -1.39
Trim56Q80VI1 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC6.36□□□□□ -1.39
Trim56Q80VI1 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Trim56Q80VI1 AC159297.1-201ENSMUST00000218689 290 ntBASIC6.36□□□□□ -1.39
Trim56Q80VI1 AC154552.4-201ENSMUST00000222171 151 ntBASIC6.36□□□□□ -1.39
Trim56Q80VI1 AC116656.1-201ENSMUST00000227040 755 ntBASIC6.36□□□□□ -1.39
Trim56Q80VI1 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC6.36□□□□□ -1.39
Trim56Q80VI1 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim56Q80VI1 Gm16415-201ENSMUST00000080097 489 ntBASIC6.36□□□□□ -1.39
Trim56Q80VI1 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trim56Q80VI1 AC154640.4-201ENSMUST00000226647 4640 ntBASIC6.36□□□□□ -1.39
Trim56Q80VI1 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim56Q80VI1 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC6.36□□□□□ -1.39
Trim56Q80VI1 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim56Q80VI1 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim56Q80VI1 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
Trim56Q80VI1 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim56Q80VI1 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim56Q80VI1 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim56Q80VI1 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
Trim56Q80VI1 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim56Q80VI1 Gm42531-201ENSMUST00000201648 4048 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim56Q80VI1 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Trim56Q80VI1 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim56Q80VI1 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim56Q80VI1 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim56Q80VI1 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Trim56Q80VI1 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim56Q80VI1 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
Trim56Q80VI1 Gm7451-201ENSMUST00000208382 1392 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim56Q80VI1 CT025556.1-201ENSMUST00000222965 1884 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Gm44901-201ENSMUST00000208157 3977 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Trim56Q80VI1 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC6.35□□□□□ -1.39
Trim56Q80VI1 Gm15382-201ENSMUST00000118011 537 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Gm2768-201ENSMUST00000121062 250 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Gm14732-201ENSMUST00000121372 545 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC6.35□□□□□ -1.39
Trim56Q80VI1 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Trim56Q80VI1 Gm25824-201ENSMUST00000157092 121 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Gm23250-201ENSMUST00000157444 267 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC6.35□□□□□ -1.39
Trim56Q80VI1 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC6.35□□□□□ -1.39
Trim56Q80VI1 Cfap61-214ENSMUST00000167179 183 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Mir496b-201ENSMUST00000184935 113 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Gm28683-201ENSMUST00000187134 615 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Gm28474-201ENSMUST00000188501 315 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Gm28840-205ENSMUST00000189320 615 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Gm28835-203ENSMUST00000190062 615 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Gm42924-201ENSMUST00000197261 185 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Gm42999-201ENSMUST00000198049 786 ntBASIC6.35□□□□□ -1.39
Trim56Q80VI1 Mir142-201ENSMUST00000198092 64 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms