Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Mir375-201ENSMUST00000083682 64 ntBASIC5.87□□□□□ -1.47
Pcdh19Q80TF3 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh19Q80TF3 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Pcdh19Q80TF3 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
Pcdh19Q80TF3 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Pcdh19Q80TF3 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Pcdh19Q80TF3 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.87□□□□□ -1.47
Pcdh19Q80TF3 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Pcdh19Q80TF3 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC5.87□□□□□ -1.47
Pcdh19Q80TF3 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh19Q80TF3 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Pcdh19Q80TF3 Gm42541-201ENSMUST00000199871 2249 ntBASIC5.87□□□□□ -1.47
Pcdh19Q80TF3 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh19Q80TF3 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.87□□□□□ -1.47
Pcdh19Q80TF3 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh19Q80TF3 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Pcdh19Q80TF3 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh19Q80TF3 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Pcdh19Q80TF3 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm5512-201ENSMUST00000218013 1353 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm25565-201ENSMUST00000104605 105 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm13331-201ENSMUST00000117500 448 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm14876-201ENSMUST00000120795 327 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm13220-201ENSMUST00000121535 508 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm12494-201ENSMUST00000121684 521 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm13531-201ENSMUST00000121893 543 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm25292-201ENSMUST00000122797 322 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm25459-201ENSMUST00000157953 114 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm24731-201ENSMUST00000158227 131 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm22261-201ENSMUST00000158691 324 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm24810-201ENSMUST00000175317 70 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm27854-201ENSMUST00000175578 244 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm21399-201ENSMUST00000180210 597 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm38131-201ENSMUST00000192449 430 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm37743-201ENSMUST00000194645 376 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Mir6906-201ENSMUST00000198998 58 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm3442-201ENSMUST00000216808 710 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 AC159380.1-201ENSMUST00000218096 121 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm19195-201ENSMUST00000222018 511 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm17915-201ENSMUST00000222077 548 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 AL669819.1-201ENSMUST00000225143 330 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Pcdh19Q80TF3 Gm8675-201ENSMUST00000201408 1856 ntBASIC5.85□□□□□ -1.47
Pcdh19Q80TF3 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Pcdh19Q80TF3 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Pcdh19Q80TF3 AC151831.1-201ENSMUST00000227609 4033 ntBASIC5.85□□□□□ -1.47
Pcdh19Q80TF3 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Pcdh19Q80TF3 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.85□□□□□ -1.47
Pcdh19Q80TF3 AC116557.1-201ENSMUST00000219494 1521 ntBASIC5.85□□□□□ -1.47
Pcdh19Q80TF3 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
Pcdh19Q80TF3 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC5.85□□□□□ -1.47
Pcdh19Q80TF3 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC5.85□□□□□ -1.47
Pcdh19Q80TF3 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC5.85□□□□□ -1.47
Pcdh19Q80TF3 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC5.85□□□□□ -1.47
Pcdh19Q80TF3 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC5.85□□□□□ -1.47
Pcdh19Q80TF3 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC5.85□□□□□ -1.47
Pcdh19Q80TF3 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC5.85□□□□□ -1.47
Pcdh19Q80TF3 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC5.85□□□□□ -1.47
Pcdh19Q80TF3 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC5.85□□□□□ -1.47
Pcdh19Q80TF3 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC5.85□□□□□ -1.47
Pcdh19Q80TF3 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC5.85□□□□□ -1.47
Pcdh19Q80TF3 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC5.85□□□□□ -1.47
Pcdh19Q80TF3 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC5.85□□□□□ -1.47
Pcdh19Q80TF3 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms