Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm25363-201ENSMUST00000158850 245 ntBASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm15974-201ENSMUST00000159103 531 ntBASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm21088-201ENSMUST00000190875 316 ntBASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm44463-201ENSMUST00000198895 137 ntBASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm43825-201ENSMUST00000199650 734 ntBASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm44295-201ENSMUST00000203805 437 ntBASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm45232-201ENSMUST00000207811 162 ntBASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm45405-201ENSMUST00000211544 609 ntBASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm8106-201ENSMUST00000213123 523 ntBASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm8681-201ENSMUST00000219115 618 ntBASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm18409-202ENSMUST00000220105 529 ntBASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 AC153924.1-201ENSMUST00000220117 312 ntBASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 AC154552.4-201ENSMUST00000222171 151 ntBASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm24319-201ENSMUST00000083389 107 ntBASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm24763-201ENSMUST00000083688 190 ntBASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sh3rf1Q69ZI1 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm12057-201ENSMUST00000117244 1427 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 AW046200-203ENSMUST00000211787 2479 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm42492-201ENSMUST00000195780 2915 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm24683-201ENSMUST00000104840 88 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm14575-201ENSMUST00000117210 560 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm12891-201ENSMUST00000119358 240 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm13170-201ENSMUST00000119716 643 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm11227-201ENSMUST00000119774 471 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm15034-201ENSMUST00000120043 349 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm14269-201ENSMUST00000120455 306 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm8761-201ENSMUST00000121507 955 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm14679-201ENSMUST00000121536 722 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm16254-201ENSMUST00000131528 730 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm23501-201ENSMUST00000157744 256 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm23662-201ENSMUST00000158046 111 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm24729-201ENSMUST00000158225 137 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm5527-201ENSMUST00000179821 642 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm38185-201ENSMUST00000193195 694 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm6510-201ENSMUST00000195916 574 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm44539-201ENSMUST00000206010 238 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm45596-201ENSMUST00000209279 434 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 n-R5s79-201ENSMUST00000083071 120 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm25859-201ENSMUST00000083710 91 ntBASIC5.84□□□□□ -1.47
Sh3rf1Q69ZI1 Gm26163-201ENSMUST00000083792 178 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms