Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm25908-201ENSMUST00000157624 98 ntBASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Gm28859-201ENSMUST00000186650 616 ntBASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Gm29479-201ENSMUST00000190352 455 ntBASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Gm20203-201ENSMUST00000192352 332 ntBASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Gm19131-201ENSMUST00000203408 789 ntBASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Gm44234-201ENSMUST00000204246 900 ntBASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Gm43892-201ENSMUST00000204373 265 ntBASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Gm18462-201ENSMUST00000208112 417 ntBASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 CT030030.1-201ENSMUST00000218809 152 ntBASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.5□□□□□ -1.69
Upf3bQ3ULL6 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Gm15076-201ENSMUST00000117076 474 ntBASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Gm12465-201ENSMUST00000118591 300 ntBASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Gm14714-201ENSMUST00000119743 439 ntBASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Gm12190-201ENSMUST00000120001 187 ntBASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Gm22084-201ENSMUST00000157585 105 ntBASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Gm26983-201ENSMUST00000182051 388 ntBASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Gm9320-201ENSMUST00000184151 473 ntBASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Gm10115-201ENSMUST00000076071 1228 ntBASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Gm25147-201ENSMUST00000083030 105 ntBASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Gm7754-201ENSMUST00000223075 2064 ntBASIC4.49□□□□□ -1.69
Upf3bQ3ULL6 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Gm18493-201ENSMUST00000192084 1612 ntBASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Gm16082-201ENSMUST00000115992 377 ntBASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Gm12173-201ENSMUST00000117622 273 ntBASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Gm12564-201ENSMUST00000119860 321 ntBASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Gm13000-201ENSMUST00000120937 496 ntBASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Gm15141-201ENSMUST00000121860 729 ntBASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Gm12103-201ENSMUST00000121892 362 ntBASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Gm15534-201ENSMUST00000137642 562 ntBASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Gm16285-201ENSMUST00000162999 347 ntBASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Mir6963-201ENSMUST00000183535 71 ntBASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Gm35702-201ENSMUST00000198653 511 ntBASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Gm43730-201ENSMUST00000199863 372 ntBASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Gm45209-201ENSMUST00000207122 353 ntBASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Gm45690-201ENSMUST00000210775 246 ntBASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Gm24919-201ENSMUST00000083020 106 ntBASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Snord22-201ENSMUST00000083153 126 ntBASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Upf3bQ3ULL6 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Upf3bQ3ULL6 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Upf3bQ3ULL6 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Upf3bQ3ULL6 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 115.7 ms