Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm22870-201ENSMUST00000157501 112 ntBASIC5.96□□□□□ -1.46
Sox1P53783 Gm24737-201ENSMUST00000158861 100 ntBASIC5.96□□□□□ -1.46
Sox1P53783 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
Sox1P53783 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC5.96□□□□□ -1.46
Sox1P53783 Mir7074-201ENSMUST00000183884 63 ntBASIC5.96□□□□□ -1.46
Sox1P53783 Mir6337-201ENSMUST00000184194 105 ntBASIC5.96□□□□□ -1.46
Sox1P53783 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sox1P53783 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.96□□□□□ -1.46
Sox1P53783 Gm43541-201ENSMUST00000197208 581 ntBASIC5.96□□□□□ -1.46
Sox1P53783 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.96□□□□□ -1.46
Sox1P53783 Gm44818-201ENSMUST00000206608 358 ntBASIC5.96□□□□□ -1.46
Sox1P53783 Gm2676-201ENSMUST00000207279 606 ntBASIC5.96□□□□□ -1.46
Sox1P53783 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC5.96□□□□□ -1.46
Sox1P53783 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.96□□□□□ -1.46
Sox1P53783 Gm2829-201ENSMUST00000213121 499 ntBASIC5.96□□□□□ -1.46
Sox1P53783 Gm7780-201ENSMUST00000214787 406 ntBASIC5.96□□□□□ -1.46
Sox1P53783 Gm19154-201ENSMUST00000223330 940 ntBASIC5.96□□□□□ -1.46
Sox1P53783 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC5.96□□□□□ -1.46
Sox1P53783 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Sox1P53783 Gm22350-201ENSMUST00000083924 156 ntBASIC5.96□□□□□ -1.46
Sox1P53783 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sox1P53783 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sox1P53783 Thap6-201ENSMUST00000191860 3151 ntBASIC5.96□□□□□ -1.46
Sox1P53783 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Sox1P53783 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Sox1P53783 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sox1P53783 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Sox1P53783 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Sox1P53783 Gm5653-201ENSMUST00000223393 1337 ntBASIC5.96□□□□□ -1.46
Sox1P53783 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Sox1P53783 Gm5925-201ENSMUST00000105016 1497 ntBASIC5.96□□□□□ -1.46
Sox1P53783 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sox1P53783 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sox1P53783 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Sox1P53783 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox1P53783 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox1P53783 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sox1P53783 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Sox1P53783 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC5.95□□□□□ -1.46
Sox1P53783 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox1P53783 AC144772.2-201ENSMUST00000228830 2859 ntBASIC5.95□□□□□ -1.46
Sox1P53783 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.95□□□□□ -1.46
Sox1P53783 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sox1P53783 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Sox1P53783 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.95□□□□□ -1.46
Sox1P53783 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC5.95□□□□□ -1.46
Sox1P53783 Gm15803-201ENSMUST00000120118 394 ntBASIC5.95□□□□□ -1.46
Sox1P53783 Gm15387-201ENSMUST00000120421 648 ntBASIC5.95□□□□□ -1.46
Sox1P53783 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sox1P53783 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.95□□□□□ -1.46
Sox1P53783 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sox1P53783 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sox1P53783 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC5.95□□□□□ -1.46
Sox1P53783 Gm16290-201ENSMUST00000161175 474 ntBASIC5.95□□□□□ -1.46
Sox1P53783 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.95□□□□□ -1.46
Sox1P53783 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC5.95□□□□□ -1.46
Sox1P53783 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Sox1P53783 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
Sox1P53783 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC5.95□□□□□ -1.46
Sox1P53783 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC5.95□□□□□ -1.46
Sox1P53783 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox1P53783 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.95□□□□□ -1.46
Sox1P53783 Gm5842-201ENSMUST00000195073 622 ntBASIC5.95□□□□□ -1.46
Sox1P53783 Mir409-201ENSMUST00000198153 79 ntBASIC5.95□□□□□ -1.46
Sox1P53783 Gm44316-201ENSMUST00000199274 97 ntBASIC5.95□□□□□ -1.46
Sox1P53783 Gm44468-201ENSMUST00000199516 105 ntBASIC5.95□□□□□ -1.46
Sox1P53783 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.95□□□□□ -1.46
Sox1P53783 Gm4501-201ENSMUST00000207330 551 ntBASIC5.95□□□□□ -1.46
Sox1P53783 Gm4558-201ENSMUST00000207886 521 ntBASIC5.95□□□□□ -1.46
Sox1P53783 Gm4528-201ENSMUST00000207905 551 ntBASIC5.95□□□□□ -1.46
Sox1P53783 Gm45628-201ENSMUST00000210849 274 ntBASIC5.95□□□□□ -1.46
Sox1P53783 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC5.95□□□□□ -1.46
Sox1P53783 Gm35558-203ENSMUST00000222264 204 ntBASIC5.95□□□□□ -1.46
Sox1P53783 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.95□□□□□ -1.46
Sox1P53783 AC127371.1-201ENSMUST00000228516 312 ntBASIC5.95□□□□□ -1.46
Sox1P53783 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.95□□□□□ -1.46
Sox1P53783 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Sox1P53783 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox1P53783 Gm22826-201ENSMUST00000083774 165 ntBASIC5.95□□□□□ -1.46
Sox1P53783 Gm5518-201ENSMUST00000084171 648 ntBASIC5.95□□□□□ -1.46
Sox1P53783 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sox1P53783 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox1P53783 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC5.95□□□□□ -1.46
Sox1P53783 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sox1P53783 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC5.95□□□□□ -1.46
Sox1P53783 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Sox1P53783 Gm38375-201ENSMUST00000194610 2227 ntBASIC5.95□□□□□ -1.46
Sox1P53783 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Sox1P53783 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox1P53783 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
Sox1P53783 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sox1P53783 Gm45457-201ENSMUST00000209931 3089 ntBASIC5.95□□□□□ -1.46
Sox1P53783 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.95□□□□□ -1.46
Sox1P53783 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sox1P53783 Gm44677-201ENSMUST00000209151 3739 ntBASIC5.95□□□□□ -1.46
Sox1P53783 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Sox1P53783 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox1P53783 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox1P53783 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sox1P53783 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms