Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
Cux1P53564 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Cux1P53564 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Cux1P53564 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Cux1P53564 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cux1P53564 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Cux1P53564 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cux1P53564 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Cux1P53564 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cux1P53564 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC6.23□□□□□ -1.41
Cux1P53564 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cux1P53564 Gm14687-201ENSMUST00000120206 363 ntBASIC6.23□□□□□ -1.41
Cux1P53564 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Cux1P53564 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Cux1P53564 Gm29097-201ENSMUST00000190273 422 ntBASIC6.23□□□□□ -1.41
Cux1P53564 Gm43084-201ENSMUST00000200696 947 ntBASIC6.23□□□□□ -1.41
Cux1P53564 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC6.23□□□□□ -1.41
Cux1P53564 AC155167.1-201ENSMUST00000228931 614 ntBASIC6.23□□□□□ -1.41
Cux1P53564 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Cux1P53564 Gm37211-201ENSMUST00000193392 3433 ntBASIC6.23□□□□□ -1.41
Cux1P53564 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cux1P53564 Gm38128-201ENSMUST00000192085 3250 ntBASIC6.23□□□□□ -1.41
Cux1P53564 Ankrd28-204ENSMUST00000227089 3522 ntBASIC6.23□□□□□ -1.41
Cux1P53564 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Cux1P53564 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Cux1P53564 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cux1P53564 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Cux1P53564 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cux1P53564 AC173482.1-201ENSMUST00000224494 3815 ntBASIC6.22□□□□□ -1.41
Cux1P53564 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Cux1P53564 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cux1P53564 Gm24935-201ENSMUST00000103770 110 ntBASIC6.22□□□□□ -1.41
Cux1P53564 Gm10241-201ENSMUST00000117664 286 ntBASIC6.22□□□□□ -1.41
Cux1P53564 Gm13690-201ENSMUST00000118989 285 ntBASIC6.22□□□□□ -1.41
Cux1P53564 Gm15014-201ENSMUST00000120742 258 ntBASIC6.22□□□□□ -1.41
Cux1P53564 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC6.22□□□□□ -1.41
Cux1P53564 Gm27828-201ENSMUST00000184108 119 ntBASIC6.22□□□□□ -1.41
Cux1P53564 Gm22897-202ENSMUST00000197782 127 ntBASIC6.22□□□□□ -1.41
Cux1P53564 Gm43941-201ENSMUST00000203303 1073 ntBASIC6.22□□□□□ -1.41
Cux1P53564 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC6.22□□□□□ -1.41
Cux1P53564 AC117949.2-201ENSMUST00000225900 584 ntBASIC6.22□□□□□ -1.41
Cux1P53564 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC6.22□□□□□ -1.41
Cux1P53564 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cux1P53564 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Cux1P53564 CT009733.2-202ENSMUST00000224171 4748 ntBASIC6.22□□□□□ -1.41
Cux1P53564 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cux1P53564 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cux1P53564 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Cux1P53564 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Cux1P53564 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Cux1P53564 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cux1P53564 Gm25727-201ENSMUST00000104522 131 ntBASIC6.21□□□□□ -1.42
Cux1P53564 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cux1P53564 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cux1P53564 Mir34b-201ENSMUST00000083558 84 ntBASIC6.21□□□□□ -1.42
Cux1P53564 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
Cux1P53564 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Cux1P53564 Fbxw23-202ENSMUST00000198480 1388 ntBASIC6.21□□□□□ -1.42
Cux1P53564 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Cux1P53564 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC6.2□□□□□ -1.42
Cux1P53564 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cux1P53564 Gm22514-201ENSMUST00000122547 308 ntBASIC6.2□□□□□ -1.42
Cux1P53564 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC6.2□□□□□ -1.42
Cux1P53564 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cux1P53564 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC6.2□□□□□ -1.42
Cux1P53564 Gm45245-201ENSMUST00000210082 376 ntBASIC6.2□□□□□ -1.42
Cux1P53564 Gm45379-201ENSMUST00000211772 549 ntBASIC6.2□□□□□ -1.42
Cux1P53564 Gm19219-201ENSMUST00000215863 724 ntBASIC6.2□□□□□ -1.42
Cux1P53564 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cux1P53564 AC156025.1-201ENSMUST00000223597 3551 ntBASIC6.2□□□□□ -1.42
Cux1P53564 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cux1P53564 Gm5117-201ENSMUST00000178878 2553 ntBASIC6.2□□□□□ -1.42
Cux1P53564 AC153969.1-201ENSMUST00000214047 2605 ntBASIC6.2□□□□□ -1.42
Cux1P53564 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Cux1P53564 AC167420.1-201ENSMUST00000222999 2121 ntBASIC6.2□□□□□ -1.42
Cux1P53564 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.2□□□□□ -1.42
Cux1P53564 Hm629797-201ENSMUST00000183645 2398 ntBASIC6.2□□□□□ -1.42
Cux1P53564 Gm42583-201ENSMUST00000202678 6700 ntBASIC6.2□□□□□ -1.42
Cux1P53564 Gm37176-201ENSMUST00000193300 4051 ntBASIC6.2□□□□□ -1.42
Cux1P53564 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cux1P53564 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cux1P53564 Gm15166-201ENSMUST00000120790 385 ntBASIC6.2□□□□□ -1.42
Cux1P53564 Gm6027-201ENSMUST00000121467 756 ntBASIC6.2□□□□□ -1.42
Cux1P53564 Gm11200-201ENSMUST00000121698 448 ntBASIC6.2□□□□□ -1.42
Cux1P53564 Gm23602-201ENSMUST00000157258 132 ntBASIC6.2□□□□□ -1.42
Cux1P53564 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cux1P53564 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC6.2□□□□□ -1.42
Cux1P53564 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC6.2□□□□□ -1.42
Cux1P53564 AC123835.1-201ENSMUST00000214362 670 ntBASIC6.2□□□□□ -1.42
Cux1P53564 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC6.2□□□□□ -1.42
Cux1P53564 CT571268.1-201ENSMUST00000222320 407 ntBASIC6.2□□□□□ -1.42
Cux1P53564 Gnrh1-202ENSMUST00000223929 428 ntBASIC6.2□□□□□ -1.42
Cux1P53564 AC144798.1-201ENSMUST00000228120 391 ntBASIC6.2□□□□□ -1.42
Cux1P53564 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cux1P53564 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cux1P53564 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cux1P53564 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Cux1P53564 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cux1P53564 Gm38248-201ENSMUST00000193744 5783 ntBASIC6.19□□□□□ -1.42
Cux1P53564 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms