Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 AC159002.2-201ENSMUST00000228843 4874 ntBASIC4.19□□□□□ -1.74
HttP42859 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
HttP42859 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
HttP42859 Gm45477-201ENSMUST00000200213 5498 ntBASIC4.19□□□□□ -1.74
HttP42859 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
HttP42859 Gm6274-201ENSMUST00000118173 797 ntBASIC4.19□□□□□ -1.74
HttP42859 Gm37355-201ENSMUST00000193345 606 ntBASIC4.19□□□□□ -1.74
HttP42859 Ighv1-46-201ENSMUST00000193988 351 ntBASIC4.19□□□□□ -1.74
HttP42859 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC4.19□□□□□ -1.74
HttP42859 Gm42727-201ENSMUST00000202446 2823 ntBASIC4.19□□□□□ -1.74
HttP42859 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HttP42859 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
HttP42859 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HttP42859 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
HttP42859 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
HttP42859 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HttP42859 Gm6893-201ENSMUST00000118385 522 ntBASIC4.18□□□□□ -1.74
HttP42859 Gm26020-201ENSMUST00000122729 183 ntBASIC4.18□□□□□ -1.74
HttP42859 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC4.18□□□□□ -1.74
HttP42859 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HttP42859 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HttP42859 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HttP42859 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HttP42859 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
HttP42859 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HttP42859 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HttP42859 Gm11673-201ENSMUST00000117846 331 ntBASIC4.18□□□□□ -1.74
HttP42859 Gm15926-201ENSMUST00000120492 550 ntBASIC4.18□□□□□ -1.74
HttP42859 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HttP42859 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC4.18□□□□□ -1.74
HttP42859 Gm29097-201ENSMUST00000190273 422 ntBASIC4.18□□□□□ -1.74
HttP42859 Gm44966-201ENSMUST00000208096 157 ntBASIC4.18□□□□□ -1.74
HttP42859 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.18□□□□□ -1.74
HttP42859 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
HttP42859 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC4.18□□□□□ -1.74
HttP42859 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HttP42859 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
HttP42859 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HttP42859 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
HttP42859 Gm13502-201ENSMUST00000121574 684 ntBASIC4.17□□□□□ -1.74
HttP42859 Gm24727-201ENSMUST00000158231 144 ntBASIC4.17□□□□□ -1.74
HttP42859 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HttP42859 Gm28574-201ENSMUST00000185757 699 ntBASIC4.17□□□□□ -1.74
HttP42859 Gm28596-201ENSMUST00000185870 696 ntBASIC4.17□□□□□ -1.74
HttP42859 Gm29062-201ENSMUST00000186032 694 ntBASIC4.17□□□□□ -1.74
HttP42859 Gm28255-201ENSMUST00000187101 694 ntBASIC4.17□□□□□ -1.74
HttP42859 Gm28397-201ENSMUST00000187970 699 ntBASIC4.17□□□□□ -1.74
HttP42859 Gm29525-201ENSMUST00000189844 699 ntBASIC4.17□□□□□ -1.74
HttP42859 Gm29523-201ENSMUST00000191415 699 ntBASIC4.17□□□□□ -1.74
HttP42859 Gm32295-201ENSMUST00000192558 696 ntBASIC4.17□□□□□ -1.74
HttP42859 Gm31260-201ENSMUST00000193478 696 ntBASIC4.17□□□□□ -1.74
HttP42859 Gm24817-201ENSMUST00000093672 105 ntBASIC4.17□□□□□ -1.74
HttP42859 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HttP42859 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
HttP42859 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
HttP42859 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
HttP42859 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HttP42859 Gm13961-201ENSMUST00000119282 4772 ntBASIC4.17□□□□□ -1.74
HttP42859 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
HttP42859 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
HttP42859 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
HttP42859 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC4.17□□□□□ -1.74
HttP42859 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC4.17□□□□□ -1.74
HttP42859 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HttP42859 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
HttP42859 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HttP42859 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.17□□□□□ -1.74
HttP42859 Gm14369-201ENSMUST00000121355 285 ntBASIC4.17□□□□□ -1.74
HttP42859 Gm25436-201ENSMUST00000158275 145 ntBASIC4.17□□□□□ -1.74
HttP42859 Gm22664-201ENSMUST00000158719 105 ntBASIC4.17□□□□□ -1.74
HttP42859 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC4.17□□□□□ -1.74
HttP42859 Gm24626-201ENSMUST00000082621 161 ntBASIC4.17□□□□□ -1.74
HttP42859 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
HttP42859 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
HttP42859 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.17□□□□□ -1.74
HttP42859 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HttP42859 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HttP42859 Gm11971-201ENSMUST00000117715 288 ntBASIC4.17□□□□□ -1.74
HttP42859 Mir8090-201ENSMUST00000185078 136 ntBASIC4.17□□□□□ -1.74
HttP42859 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HttP42859 Gm5374-202ENSMUST00000222910 314 ntBASIC4.17□□□□□ -1.74
HttP42859 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HttP42859 Gm42992-201ENSMUST00000197043 6836 ntBASIC4.17□□□□□ -1.74
HttP42859 Gm44800-201ENSMUST00000207510 1855 ntBASIC4.16□□□□□ -1.74
HttP42859 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HttP42859 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HttP42859 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
HttP42859 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HttP42859 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HttP42859 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
HttP42859 Mir879-201ENSMUST00000104703 76 ntBASIC4.16□□□□□ -1.74
HttP42859 Gm27457-201ENSMUST00000184771 156 ntBASIC4.16□□□□□ -1.74
HttP42859 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.16□□□□□ -1.74
HttP42859 Gm42492-201ENSMUST00000195780 2915 ntBASIC4.16□□□□□ -1.74
HttP42859 Gm44308-201ENSMUST00000197080 99 ntBASIC4.16□□□□□ -1.74
HttP42859 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HttP42859 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
HttP42859 Gm5649-201ENSMUST00000217918 951 ntBASIC4.16□□□□□ -1.74
HttP42859 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.16□□□□□ -1.74
HttP42859 AC192616.2-201ENSMUST00000221482 3841 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms