Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Traf1P39428 Gm24854-201ENSMUST00000158025 98 ntBASIC5.28□□□□□ -1.56
Traf1P39428 Gm22536-201ENSMUST00000158171 134 ntBASIC5.28□□□□□ -1.56
Traf1P39428 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Traf1P39428 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Traf1P39428 Gm18415-201ENSMUST00000177464 647 ntBASIC5.28□□□□□ -1.56
Traf1P39428 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Traf1P39428 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Traf1P39428 Gm28639-201ENSMUST00000191519 481 ntBASIC5.28□□□□□ -1.56
Traf1P39428 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Traf1P39428 Gm37095-201ENSMUST00000195421 205 ntBASIC5.28□□□□□ -1.56
Traf1P39428 Gm42999-201ENSMUST00000198049 786 ntBASIC5.28□□□□□ -1.56
Traf1P39428 Gm45032-201ENSMUST00000205375 520 ntBASIC5.28□□□□□ -1.56
Traf1P39428 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Traf1P39428 AC154296.3-201ENSMUST00000214427 712 ntBASIC5.28□□□□□ -1.56
Traf1P39428 AC140368.1-202ENSMUST00000226131 658 ntBASIC5.28□□□□□ -1.56
Traf1P39428 AC154657.1-201ENSMUST00000226394 775 ntBASIC5.28□□□□□ -1.56
Traf1P39428 AC127371.1-201ENSMUST00000228516 312 ntBASIC5.28□□□□□ -1.56
Traf1P39428 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Traf1P39428 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Traf1P39428 Gm6177-201ENSMUST00000085589 465 ntBASIC5.28□□□□□ -1.56
Traf1P39428 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Traf1P39428 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Traf1P39428 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Traf1P39428 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Traf1P39428 AC160130.1-201ENSMUST00000220734 2735 ntBASIC5.28□□□□□ -1.56
Traf1P39428 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Traf1P39428 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Traf1P39428 AC131068.3-201ENSMUST00000228438 1456 ntBASIC5.27□□□□□ -1.57
Traf1P39428 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Traf1P39428 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Traf1P39428 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
Traf1P39428 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC5.27□□□□□ -1.57
Traf1P39428 Gm14067-201ENSMUST00000119340 314 ntBASIC5.27□□□□□ -1.57
Traf1P39428 Gm14516-201ENSMUST00000120012 252 ntBASIC5.27□□□□□ -1.57
Traf1P39428 Gm12884-201ENSMUST00000120371 325 ntBASIC5.27□□□□□ -1.57
Traf1P39428 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC5.27□□□□□ -1.57
Traf1P39428 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Traf1P39428 Gm23960-201ENSMUST00000157206 131 ntBASIC5.27□□□□□ -1.57
Traf1P39428 Gm22383-201ENSMUST00000158188 327 ntBASIC5.27□□□□□ -1.57
Traf1P39428 Gm15796-201ENSMUST00000162135 204 ntBASIC5.27□□□□□ -1.57
Traf1P39428 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.27□□□□□ -1.57
Traf1P39428 Gm6155-201ENSMUST00000173735 341 ntBASIC5.27□□□□□ -1.57
Traf1P39428 Gm27864-201ENSMUST00000183704 190 ntBASIC5.27□□□□□ -1.57
Traf1P39428 Mir7074-201ENSMUST00000183884 63 ntBASIC5.27□□□□□ -1.57
Traf1P39428 Gm27611-201ENSMUST00000184690 108 ntBASIC5.27□□□□□ -1.57
Traf1P39428 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Traf1P39428 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.27□□□□□ -1.57
Traf1P39428 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC5.27□□□□□ -1.57
Traf1P39428 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC5.27□□□□□ -1.57
Traf1P39428 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC5.27□□□□□ -1.57
Traf1P39428 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC5.27□□□□□ -1.57
Traf1P39428 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC5.27□□□□□ -1.57
Traf1P39428 Gm45499-201ENSMUST00000211656 280 ntBASIC5.27□□□□□ -1.57
Traf1P39428 Gm3338-201ENSMUST00000220982 269 ntBASIC5.27□□□□□ -1.57
Traf1P39428 AC159622.1-201ENSMUST00000221004 554 ntBASIC5.27□□□□□ -1.57
Traf1P39428 CU024892.1-201ENSMUST00000224869 515 ntBASIC5.27□□□□□ -1.57
Traf1P39428 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.27□□□□□ -1.57
Traf1P39428 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.27□□□□□ -1.57
Traf1P39428 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC5.27□□□□□ -1.57
Traf1P39428 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Traf1P39428 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Traf1P39428 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Traf1P39428 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Traf1P39428 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Traf1P39428 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Traf1P39428 AC144772.3-201ENSMUST00000228829 3126 ntBASIC5.26□□□□□ -1.57
Traf1P39428 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Traf1P39428 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Traf1P39428 Gm11914-201ENSMUST00000117094 507 ntBASIC5.26□□□□□ -1.57
Traf1P39428 Gm649-201ENSMUST00000117284 1054 ntBASIC5.26□□□□□ -1.57
Traf1P39428 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC5.26□□□□□ -1.57
Traf1P39428 Gm15785-201ENSMUST00000119145 694 ntBASIC5.26□□□□□ -1.57
Traf1P39428 Gm13788-201ENSMUST00000120767 601 ntBASIC5.26□□□□□ -1.57
Traf1P39428 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Traf1P39428 Gm25264-201ENSMUST00000158519 117 ntBASIC5.26□□□□□ -1.57
Traf1P39428 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.26□□□□□ -1.57
Traf1P39428 Gm17131-201ENSMUST00000164420 3846 ntBASIC5.26□□□□□ -1.57
Traf1P39428 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Traf1P39428 Gm27165-201ENSMUST00000183951 232 ntBASIC5.26□□□□□ -1.57
Traf1P39428 Gm18406-201ENSMUST00000185872 669 ntBASIC5.26□□□□□ -1.57
Traf1P39428 Gm29525-201ENSMUST00000189844 699 ntBASIC5.26□□□□□ -1.57
Traf1P39428 Gm29523-201ENSMUST00000191415 699 ntBASIC5.26□□□□□ -1.57
Traf1P39428 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Traf1P39428 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC5.26□□□□□ -1.57
Traf1P39428 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Traf1P39428 Gm44038-201ENSMUST00000203952 889 ntBASIC5.26□□□□□ -1.57
Traf1P39428 Gm44234-201ENSMUST00000204246 900 ntBASIC5.26□□□□□ -1.57
Traf1P39428 Gm44665-201ENSMUST00000205381 251 ntBASIC5.26□□□□□ -1.57
Traf1P39428 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Traf1P39428 AC132104.1-201ENSMUST00000213615 260 ntBASIC5.26□□□□□ -1.57
Traf1P39428 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC5.26□□□□□ -1.57
Traf1P39428 AC134254.4-201ENSMUST00000223086 370 ntBASIC5.26□□□□□ -1.57
Traf1P39428 AC132112.1-201ENSMUST00000226354 505 ntBASIC5.26□□□□□ -1.57
Traf1P39428 AC117202.1-201ENSMUST00000227007 445 ntBASIC5.26□□□□□ -1.57
Traf1P39428 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Traf1P39428 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Traf1P39428 Gm23875-201ENSMUST00000083711 318 ntBASIC5.26□□□□□ -1.57
Traf1P39428 n-R5s168-201ENSMUST00000083948 104 ntBASIC5.26□□□□□ -1.57
Traf1P39428 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms