Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm15167-201ENSMUST00000121997 187 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm8648-201ENSMUST00000122457 221 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm23214-201ENSMUST00000122716 157 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm23206-201ENSMUST00000122720 184 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm22597-201ENSMUST00000157602 80 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm20415-201ENSMUST00000172877 423 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm23632-201ENSMUST00000175289 125 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm24415-201ENSMUST00000180218 107 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Mir6401-201ENSMUST00000184499 109 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm28995-201ENSMUST00000186625 261 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm43355-201ENSMUST00000196541 346 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm43804-201ENSMUST00000198280 456 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm44856-201ENSMUST00000206639 304 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim39Q9ESN2 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC5.79□□□□□ -1.48
Trim39Q9ESN2 AC166341.3-201ENSMUST00000221861 114 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim39Q9ESN2 AL606472.1-201ENSMUST00000224628 275 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Snord42a-201ENSMUST00000082606 65 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm23238-201ENSMUST00000083007 164 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trim39Q9ESN2 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm45633-201ENSMUST00000210669 3253 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim39Q9ESN2 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm42639-201ENSMUST00000197061 1871 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim39Q9ESN2 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.79□□□□□ -1.48
Trim39Q9ESN2 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Slamf6-207ENSMUST00000195656 5729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm42680-201ENSMUST00000196238 2500 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm22834-201ENSMUST00000102021 79 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm24715-201ENSMUST00000102377 95 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm11970-201ENSMUST00000116105 320 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm2005-201ENSMUST00000120759 542 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm14129-201ENSMUST00000122436 291 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm26037-201ENSMUST00000158150 311 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm22085-201ENSMUST00000158344 110 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm25048-201ENSMUST00000158598 91 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm22716-201ENSMUST00000177596 107 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm14527-201ENSMUST00000179300 639 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Mir3473e-201ENSMUST00000183932 110 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm21735-201ENSMUST00000190360 696 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm43043-201ENSMUST00000196579 412 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm44463-201ENSMUST00000198895 137 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm7709-201ENSMUST00000199391 1858 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm7832-201ENSMUST00000202613 880 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm43941-201ENSMUST00000203303 1073 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm4556-201ENSMUST00000217808 355 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 Gm7413-201ENSMUST00000219498 462 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 AC124586.1-201ENSMUST00000221673 2795 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 AC154328.1-201ENSMUST00000225875 307 ntBASIC5.78□□□□□ -1.48
Trim39Q9ESN2 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms