Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ndc1Q8VCB1 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.26□□□□□ -1.57
Ndc1Q8VCB1 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ndc1Q8VCB1 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ndc1Q8VCB1 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm5653-201ENSMUST00000223393 1337 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 AC163660.3-201ENSMUST00000224253 1563 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm25097-201ENSMUST00000104042 145 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm22499-201ENSMUST00000104501 135 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm11854-201ENSMUST00000117839 446 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm13379-201ENSMUST00000118053 621 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm15387-201ENSMUST00000120421 648 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm22106-201ENSMUST00000122544 127 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm7855-201ENSMUST00000137737 687 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm22236-201ENSMUST00000157093 106 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm24940-201ENSMUST00000158326 108 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Ear-ps9-201ENSMUST00000161963 460 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm29634-201ENSMUST00000188467 696 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm28699-201ENSMUST00000189193 696 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm2367-201ENSMUST00000192374 472 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm37164-201ENSMUST00000192809 637 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm5842-201ENSMUST00000195073 622 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm22897-201ENSMUST00000197860 128 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm7624-201ENSMUST00000209702 435 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm45530-201ENSMUST00000211658 225 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 AC073947.3-201ENSMUST00000215576 766 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 AC139376.1-201ENSMUST00000220056 1250 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm7768-201ENSMUST00000222988 597 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm24525-201ENSMUST00000082917 151 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Mir133b-201ENSMUST00000083546 119 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Mir337-201ENSMUST00000083592 97 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm5518-201ENSMUST00000084171 648 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Gm6757-201ENSMUST00000189810 1706 ntBASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
Ndc1Q8VCB1 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
Ndc1Q8VCB1 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.24□□□□□ -1.57
Ndc1Q8VCB1 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Ndc1Q8VCB1 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
Ndc1Q8VCB1 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Ndc1Q8VCB1 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
Ndc1Q8VCB1 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.24□□□□□ -1.57
Ndc1Q8VCB1 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.24□□□□□ -1.57
Ndc1Q8VCB1 Gm14918-201ENSMUST00000118153 268 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms