Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm6056-201ENSMUST00000221253 488 ntBASIC5.61□□□□□ -1.51
Ccdc9Q8VC31 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ccdc9Q8VC31 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ccdc9Q8VC31 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc9Q8VC31 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc9Q8VC31 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ccdc9Q8VC31 n-R5s36-201ENSMUST00000082998 119 ntBASIC5.61□□□□□ -1.51
Ccdc9Q8VC31 Mir202-201ENSMUST00000083568 72 ntBASIC5.61□□□□□ -1.51
Ccdc9Q8VC31 Mir350-201ENSMUST00000083639 99 ntBASIC5.61□□□□□ -1.51
Ccdc9Q8VC31 Gm23102-201ENSMUST00000083724 116 ntBASIC5.61□□□□□ -1.51
Ccdc9Q8VC31 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc9Q8VC31 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ccdc9Q8VC31 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ccdc9Q8VC31 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Ccdc9Q8VC31 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm13731-201ENSMUST00000117332 196 ntBASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm11825-201ENSMUST00000120710 736 ntBASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm15780-201ENSMUST00000121283 935 ntBASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm15428-201ENSMUST00000121352 333 ntBASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm11910-201ENSMUST00000121624 432 ntBASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm11358-201ENSMUST00000122310 373 ntBASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm28859-201ENSMUST00000186650 616 ntBASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm36954-201ENSMUST00000195362 363 ntBASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm2622-201ENSMUST00000200018 471 ntBASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm43478-201ENSMUST00000200381 292 ntBASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm44869-201ENSMUST00000208836 357 ntBASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm5358-201ENSMUST00000212814 353 ntBASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm9472-201ENSMUST00000221625 526 ntBASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 AC134864.1-201ENSMUST00000226326 511 ntBASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc9Q8VC31 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Gm10484-201ENSMUST00000196372 4759 ntBASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Mir466j-201ENSMUST00000116876 122 ntBASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Gm11408-201ENSMUST00000117889 519 ntBASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Gm13557-201ENSMUST00000120771 382 ntBASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Gm11677-201ENSMUST00000121349 977 ntBASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Gm24931-201ENSMUST00000158324 107 ntBASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Gm16456-201ENSMUST00000174431 920 ntBASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Mir6539-201ENSMUST00000183732 110 ntBASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Gm27286-201ENSMUST00000184934 179 ntBASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Gm19002-201ENSMUST00000192649 1012 ntBASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Gm18900-201ENSMUST00000193218 584 ntBASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Gm43054-201ENSMUST00000199495 884 ntBASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Gm42857-201ENSMUST00000200823 339 ntBASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Gm19170-201ENSMUST00000212440 1084 ntBASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 AL929265.1-201ENSMUST00000213427 125 ntBASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 AC157017.2-201ENSMUST00000218354 777 ntBASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 Gm4928-201ENSMUST00000219622 850 ntBASIC5.59□□□□□ -1.51
Ccdc9Q8VC31 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms